Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | STER_1292 |
Symbol | |
ID | 4436931 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptococcus thermophilus LMD-9 |
Kingdom | Bacteria |
Replicon accession | NC_008532 |
Strand | - |
Start bp | 1200510 |
End bp | 1201247 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 639676915 |
Product | ABC-type multidrug transport system, permease component |
Protein accession | YP_820668 |
Protein GI | 116628049 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000120577 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGCAC TACTTAAAAT CGAATGGATA AAAACATGGC GCAGTTGGCC AGTCTTCATC ATGTCCATCG GAATGCCCGT CGGATTCTTC CTCTTGTATT CAGGTATGGA AATGAGTCCT GACCCTGAAT CACAAAAAGC CTTTATCTTG TCCTATATGT TGACCATGAC TGGATTTTCT ATGTCTAGCT TTGGTTTCTT TACCTTCCCC TACATGCTTA GAGAGGATCA AACCGATCAC TGGTTAACTT ACATCGAACA TTCAAAAATC AGTATTCAGG CCTATTACCT GTCAAAAATC TTCCGAGTTC TTATGAACTT TATGGTTGCT ATCCTAGTGA CTTTCTGTGT AGGAGCTTTT GTGCGTGATG TTAAGATGCC ATTATCACAT TGGCTCGGTT CAGGTGCTCT TTTACTCTTG TCAAGTCTAG TCTTCCTATC CTTTGGCTTA CTCCTAGTCC AAATTAAGTC TCAACAAATC ATGGCTATCG TCGGAAATAT CGTCTTTTTT GGTCTAGCTA TTATTGGTGG TTCTTGGATG CCAGTAACCT TGTTTCCAAA ATGGGTTCAG CACATTTCCG AGTGGACACC CATCTATCAT ATTAATCAGT TGGTAGTCAA TTTTGCGAAA AAAGGGGAAT TTTCATGGAA ATCACTCATT TTTATCTTGG TCTATGCTAC AATAGCTACA GGCTTAGCCC TTTTTATCAA ATCGTACAGA GAAAGTGACC ATGTTTAG
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Protein sequence | MKALLKIEWI KTWRSWPVFI MSIGMPVGFF LLYSGMEMSP DPESQKAFIL SYMLTMTGFS MSSFGFFTFP YMLREDQTDH WLTYIEHSKI SIQAYYLSKI FRVLMNFMVA ILVTFCVGAF VRDVKMPLSH WLGSGALLLL SSLVFLSFGL LLVQIKSQQI MAIVGNIVFF GLAIIGGSWM PVTLFPKWVQ HISEWTPIYH INQLVVNFAK KGEFSWKSLI FILVYATIAT GLALFIKSYR ESDHV
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