| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | STER_0972 |
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| Symbol | |
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| ID | 4438243 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Streptococcus thermophilus LMD-9 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008532 |
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| Strand | + |
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| Start bp | 897458 |
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| End bp | 898189 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 639676631 |
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| Product | CRISPR-associated RAMP superfamily protein |
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| Protein accession | YP_820385 |
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| Protein GI | 116627766 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5551] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR01877] CRISPR-associated endoribonuclease Cas6 |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000560395 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAAAAT TAGTATTTAC TTTTAAAAGG ATCGACCATC CTGCACAAGA TTTGGCTGTT
AAATTTCATG GCTTCTTGAT GGAGCAGTTG GATAGTGACT ATGTTGATTA TCTGCATCAG
CAGCAAACAA ATCCCTATGC GACCAAGGTA ATCCAAGGGA AAGAAAACAC GCAGTGGGTT
GTACATCTGC TCACAGACGA CATCGAGGAT AAGGTTTTTA TGACCTTATT ACAGATTAAA
GAGGTGTCCT TAAACGATCT GCCTAAACTC AGTGTCGAAA AAGTTGAGAT TCAGGAGTTG
GGGACAGATA AACTGTTAGA GATTTTCAAT AGTGAGGAAA ATCAAACCTA TTTTTCAATT
ATTTTTGAGA CTCCAACAGG TTTTAAATCT CAAGGTTCCT ACGTCATCTT CCCGTCTATG
CGTTTGATTT TTCAAAGTTT GATGCAAAAG TATGGAAGGT TGGTTGAAAA TCAACCTGAA
ATTGAAGAGG ATACCTTAGA TTACCTATCT GAACACAGCA CTATCACGAA TTATCGCTTG
GAGACGAGTT ATTTCAGGGT GCACAGGCAA CGAATTCCTG CCTTTAGAGG AAAGTTAACC
TTTAAAGTAC AAGGCGCCAA AACTCTAAAA GCTTATGTCA AAATGCTTCT AACATTCGGT
GAATATTCAG GTCTTGGCAT GAAAACGAGT CTCGGTATGG GAGGGATAAA GCTTGAAGAA
AGAAAAGATT GA
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| Protein sequence | MKKLVFTFKR IDHPAQDLAV KFHGFLMEQL DSDYVDYLHQ QQTNPYATKV IQGKENTQWV
VHLLTDDIED KVFMTLLQIK EVSLNDLPKL SVEKVEIQEL GTDKLLEIFN SEENQTYFSI
IFETPTGFKS QGSYVIFPSM RLIFQSLMQK YGRLVENQPE IEEDTLDYLS EHSTITNYRL
ETSYFRVHRQ RIPAFRGKLT FKVQGAKTLK AYVKMLLTFG EYSGLGMKTS LGMGGIKLEE
RKD
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