Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | STER_0845 |
Symbol | |
ID | 4438496 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptococcus thermophilus LMD-9 |
Kingdom | Bacteria |
Replicon accession | NC_008532 |
Strand | + |
Start bp | 773056 |
End bp | 774594 |
Gene Length | 1539 bp |
Protein Length | 512 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 639676528 |
Product | chloride channel protein EriC |
Protein accession | YP_820282 |
Protein GI | 116627663 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0038] Chloride channel protein EriC |
TIGRFAM ID | [TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAAAATC ACCGGAAAGA AGTTAGTTTT ATTTCGCAAT CAATCATCTA TTCGGTTCTG CTTGGTATTA TAGTTGGTAT TGCTGCTGGT TTAGTGGTTG TTGTATTTCG CTTAGCCATT GAAAAACTAT TTGGTGTTTT TTCACACCTC TATCCTCTGG CAACAGACAA TCCAATCTAT TTACTTCTTA TTGGGGGGCT TTATCTGGTT ATAGCTTTAC TTGTTGGCCA CTTGATTAAG TACGAACCCA ATGCAAAAGG TTCCGGAATT CCTCAAGTTG AAGCGGAACT AAAAGGATTG ATGGATTTAA GTTGGTGGTC AGTTCTTTGG AAAAAATTTA TCGGTGGCGT TTTATCCATT GCATCGGGCT TAATGCTGGG TCGAGAAGGT CCCAGTATTC AACTAGGTGC TCTAACAGCT AAAGGTGTAT CAGTTCTTCT TAAATCCAGT GAAATGGAAA GAAGGAGTTT AATTGCTAGT GGTGCCGCGG CTGGTTTGGC AGCGGCTTTC AATGCCCCAA TAGCTGGACT TTTATTTGTT GTAGAGGAAG TCTATCATCA GTTTTCGCGG CTGGTTTGGG TCTCAGCCTT AGCTGCTAGT ATCACTGCAA ACTTTATTTC CTTACATGTT TTTGGATTAA CACCTGTTTT GCACATGCCG GAAGATTTGC AGCTACTATC TCTTGACCAA TATTGGATCT ATATCTTACT TGGTATTTTC CTTGGGCTTG CTGGATATGT ATATGAAGTT GTTATCCTCA ACATACAAGT TTTCTATACC ATGCTTGCAA AAATCATTCC TCTCCCAGCT CCGTATTATA GTGTATTTGC CTTTTTGTTC ATCATGCCGA TTGGTTATTA TTTCCCTAAT CTATTGGGTG GCGGGCATCA TTTGATTTTA GAGCTTCCAC ATCTGGATCA AGGGCTACTG ACATTAGCAA TCTTGATTTT AATACGATTT GTATGGAGTA TGATTTCTTA TGGTTCTGGT CTACCAGGGG GGATCTTTTT GCCTATATTA ACCTTAGGAA GTCTCCTTGG TCTATTTGTT GCACGGTTCT TCCTTGATAT TGGTTTCATC AGTCAGGACC AGATGCTATT GTTTATTGTA TTGGGGATGG CAGGCTTCTT TTCAGCGATT TCCAAAGCCC CTCTAACTGC TATTATTCTA GTAACTGAAA TGGTAGGAAG TTTGAATCAA TTGATGGTCA TTGGGTTGGT GGTTTTGAGT TCCTATGTGA TAATGGACAT CTTAGGTGGC GCGCCTGTCT ACGAAGCGAT GTTGGAAAAA ATTCTGCCAG AAGAAGTAGA ACAGCAAGAA CATATGACCT TAATAGAGGT TGTTGTCAAC GAAACTTTGG ATCAAACCTT TGTAAGTGAG TTACGTTTGC CGGATTCATG CTTGATTACC AGCCAAATTC ATCACGGAAA GTCTAGGATT GTGAAAGGAA ACAGCCAACT TTTTATGGGT GATTCCTTGC TCGTTGCAGT TCCAATTTCA CAAATTCATG CCGTTCATAA GATATTTGAG GGAGATTAG
|
Protein sequence | MENHRKEVSF ISQSIIYSVL LGIIVGIAAG LVVVVFRLAI EKLFGVFSHL YPLATDNPIY LLLIGGLYLV IALLVGHLIK YEPNAKGSGI PQVEAELKGL MDLSWWSVLW KKFIGGVLSI ASGLMLGREG PSIQLGALTA KGVSVLLKSS EMERRSLIAS GAAAGLAAAF NAPIAGLLFV VEEVYHQFSR LVWVSALAAS ITANFISLHV FGLTPVLHMP EDLQLLSLDQ YWIYILLGIF LGLAGYVYEV VILNIQVFYT MLAKIIPLPA PYYSVFAFLF IMPIGYYFPN LLGGGHHLIL ELPHLDQGLL TLAILILIRF VWSMISYGSG LPGGIFLPIL TLGSLLGLFV ARFFLDIGFI SQDQMLLFIV LGMAGFFSAI SKAPLTAIIL VTEMVGSLNQ LMVIGLVVLS SYVIMDILGG APVYEAMLEK ILPEEVEQQE HMTLIEVVVN ETLDQTFVSE LRLPDSCLIT SQIHHGKSRI VKGNSQLFMG DSLLVAVPIS QIHAVHKIFE GD
|
| |