Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | STER_0829 |
Symbol | |
ID | 4438480 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptococcus thermophilus LMD-9 |
Kingdom | Bacteria |
Replicon accession | NC_008532 |
Strand | + |
Start bp | 755280 |
End bp | 756446 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 639676516 |
Product | integrase |
Protein accession | YP_820270 |
Protein GI | 116627651 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.141939 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATTA ACGAGATAAA GAAAAAAGAC GGCTCAACCG TCTATCGTGC TAATATATAT CTTGGTGTTG ATGTAATCAC TGGAAAGAAA GTTACAACCA AAGTAACCGC TAGGACAAAG AAAGAACTCA AGACCAAAGC CCAACAAGCG CAATTTGATT TTAAAGCCAA TGGCTCAACA CGTTACAAAG AAGTAGCGAT AGAAACATAC GAGGAATTAG CTATTTCATG GTGGGATAGC TATAAAAATA CAGTTAAAGC TAACACAAAG AGGGCACAAA AAGGGCTCTT AAATAACCAT GTTTTACCGT TGTTTGGTGA GTTTAAACTG GATAAGCTGA CAACCCCACT CATTCAGTCC ATGATGAATA AGCTGGCAAA CAGTACAAAT ACTGGTGAGG CTGGCGCTTA TCTTCATTAC GACAAAATTC ACGCGCTTAA CAAGCGTATT TTACAGTATG GGGTAGTTTT ACAAGTTATC CCCACTAACC CAGCTAATAA TGTTGTTTTA CCTCGAAACA CTCAAAAGGA TAAGAAAGCA AAAGTTAAGC ATTTCAACAA TGACGAGCTA AAACAATTTC TTACCTACCT TGATAGTTTA GACAACTCTA AATATAAAAA TTATTATGAC ATCACGCTAT ACAAGTTCTT ACTTGCCACT GGTTGCCGTA TTAACGAGGC TTTGGCTCTC TCATGGTCTG ATATTGACCT TGATAACTCG GTTGTCCATA TAACCAAGAC TTTAAACTAT GAAATGAAGT TAAACAGTCC AAAATCAAAA TCTGGTTACC GAGATATAGA CATAGATAAG CAAACCGTAA CCATGATGAA AAGATACCAA CACAAGCAAA CTCAAGAAGC TTGGAAACTA GGTAGGACTG AAACAGTGGT ATTCTCGGAC TTTATACATG AATATCCTAA TAGCCGTACC TTGCAAAGTC GATTAGGAAC ACACTTTAAA CGCGCTGGGG TAACTAACAT AGGTTTCCAC GGTTTTCGAC ATACTCATGC TAGTTTACTT CTTAATTCGG GTATTCCTTA TAAGGAGTTG CAACACCGTC TAGGACATTC TAAACTTTCA ATGACTATGG ACATATACAG TCACTTATCA AAAGAGAACG CTAAAAAAGC CGTCTCATTC TATGAAGTGG CTCTAAAATC CATATAA
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Protein sequence | MKINEIKKKD GSTVYRANIY LGVDVITGKK VTTKVTARTK KELKTKAQQA QFDFKANGST RYKEVAIETY EELAISWWDS YKNTVKANTK RAQKGLLNNH VLPLFGEFKL DKLTTPLIQS MMNKLANSTN TGEAGAYLHY DKIHALNKRI LQYGVVLQVI PTNPANNVVL PRNTQKDKKA KVKHFNNDEL KQFLTYLDSL DNSKYKNYYD ITLYKFLLAT GCRINEALAL SWSDIDLDNS VVHITKTLNY EMKLNSPKSK SGYRDIDIDK QTVTMMKRYQ HKQTQEAWKL GRTETVVFSD FIHEYPNSRT LQSRLGTHFK RAGVTNIGFH GFRHTHASLL LNSGIPYKEL QHRLGHSKLS MTMDIYSHLS KENAKKAVSF YEVALKSI
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