| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | STER_0829 |
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| Symbol | |
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| ID | 4438480 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Streptococcus thermophilus LMD-9 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008532 |
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| Strand | + |
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| Start bp | 755280 |
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| End bp | 756446 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 639676516 |
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| Product | integrase |
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| Protein accession | YP_820270 |
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| Protein GI | 116627651 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.141939 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATTA ACGAGATAAA GAAAAAAGAC GGCTCAACCG TCTATCGTGC TAATATATAT
CTTGGTGTTG ATGTAATCAC TGGAAAGAAA GTTACAACCA AAGTAACCGC TAGGACAAAG
AAAGAACTCA AGACCAAAGC CCAACAAGCG CAATTTGATT TTAAAGCCAA TGGCTCAACA
CGTTACAAAG AAGTAGCGAT AGAAACATAC GAGGAATTAG CTATTTCATG GTGGGATAGC
TATAAAAATA CAGTTAAAGC TAACACAAAG AGGGCACAAA AAGGGCTCTT AAATAACCAT
GTTTTACCGT TGTTTGGTGA GTTTAAACTG GATAAGCTGA CAACCCCACT CATTCAGTCC
ATGATGAATA AGCTGGCAAA CAGTACAAAT ACTGGTGAGG CTGGCGCTTA TCTTCATTAC
GACAAAATTC ACGCGCTTAA CAAGCGTATT TTACAGTATG GGGTAGTTTT ACAAGTTATC
CCCACTAACC CAGCTAATAA TGTTGTTTTA CCTCGAAACA CTCAAAAGGA TAAGAAAGCA
AAAGTTAAGC ATTTCAACAA TGACGAGCTA AAACAATTTC TTACCTACCT TGATAGTTTA
GACAACTCTA AATATAAAAA TTATTATGAC ATCACGCTAT ACAAGTTCTT ACTTGCCACT
GGTTGCCGTA TTAACGAGGC TTTGGCTCTC TCATGGTCTG ATATTGACCT TGATAACTCG
GTTGTCCATA TAACCAAGAC TTTAAACTAT GAAATGAAGT TAAACAGTCC AAAATCAAAA
TCTGGTTACC GAGATATAGA CATAGATAAG CAAACCGTAA CCATGATGAA AAGATACCAA
CACAAGCAAA CTCAAGAAGC TTGGAAACTA GGTAGGACTG AAACAGTGGT ATTCTCGGAC
TTTATACATG AATATCCTAA TAGCCGTACC TTGCAAAGTC GATTAGGAAC ACACTTTAAA
CGCGCTGGGG TAACTAACAT AGGTTTCCAC GGTTTTCGAC ATACTCATGC TAGTTTACTT
CTTAATTCGG GTATTCCTTA TAAGGAGTTG CAACACCGTC TAGGACATTC TAAACTTTCA
ATGACTATGG ACATATACAG TCACTTATCA AAAGAGAACG CTAAAAAAGC CGTCTCATTC
TATGAAGTGG CTCTAAAATC CATATAA
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| Protein sequence | MKINEIKKKD GSTVYRANIY LGVDVITGKK VTTKVTARTK KELKTKAQQA QFDFKANGST
RYKEVAIETY EELAISWWDS YKNTVKANTK RAQKGLLNNH VLPLFGEFKL DKLTTPLIQS
MMNKLANSTN TGEAGAYLHY DKIHALNKRI LQYGVVLQVI PTNPANNVVL PRNTQKDKKA
KVKHFNNDEL KQFLTYLDSL DNSKYKNYYD ITLYKFLLAT GCRINEALAL SWSDIDLDNS
VVHITKTLNY EMKLNSPKSK SGYRDIDIDK QTVTMMKRYQ HKQTQEAWKL GRTETVVFSD
FIHEYPNSRT LQSRLGTHFK RAGVTNIGFH GFRHTHASLL LNSGIPYKEL QHRLGHSKLS
MTMDIYSHLS KENAKKAVSF YEVALKSI
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