Gene STER_0793 details

Gene Information

• Locus tag: STER_0793
• Symbol: prfA
• ID: 4437899
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Streptococcus thermophilus LMD-9
• Kingdom: Bacteria
• Replicon accession: NC_008532
• Strand: +
• Start bp: 725315
• End bp: 726394
• Gene Length: 1080 bp
• Protein Length: 359 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 639676485
• Product: peptide chain release factor 1
• Protein accession: YP_820239
• Protein GI: 116627620
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0216] Protein chain release factor A
• TIGRFAM ID: [TIGR00019] peptide chain release factor 1

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.510985
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACATTT ATGATCAGTT GCAGGCGGTT GAAGACCGTT ATGAGGAATT GGGCGAATTG 
CTTAGCGACC CTGAAGTTGT ATCAGATACT AAACGCTTCA TGGAGTTGTC GCGTGAAGAG 
GCTAACACCC GTGAAACTGT CATAGCTTAC CGTGAGTACA AGCAAGTTAT CCAAAATATC 
TCAGATGCTG AAGAGATGAT TAAGGAAGCT AGTGGTGATG CTGATTTGGA AGAAATGGCT 
AAGGAAGAAC TTAAAAAATC CAAAGCAGCT AAAGAAGAGT ATGAAGAACG CTTGAAAATT 
CTCCTCTTGC CAAAAGACCC TAATGACGAC AAGAATATCA TCCTTGAAAT TCGTGGGGCT 
GCTGGGGGAG ATGAGGCTGC CTTATTTGCG GGTGACCTCC TAGCTATGTA CCAAAAATAC 
GCCGAAACAC AAGGGTGGCG CTTTGAAGTA ATGGAAGCAT CATACAATGG TGTTGGTGGT 
ATCAAGGAAG TGGTTGCCAT GGTTTCAGGA GAATCAGTCT ACTCTAAACT CAAATATGAG 
TCTGGAGCAC ATCGTGTACA ACGTGTCCCT GTGACCGAAA GTCAAGGTCG TGTTCATACC 
TCTACAGCAA CTGTTTTGGT AATGCCAGAA GTTGAAGAAA TGGAGTACGA AATCGATCCT 
AAGGATCTTC GTGTCGATAT CTATCACGCC TCTGGTGCCG GTGGACAGAA CGTCAATAAG 
GTTGCAACTG CGGTGCGTAT GGTTCACATT CCTACTGGAA TTAAAGTTGA GATGCAAGAA 
GAACGTACCC AACAGAAAAA CCGTGATAAA GCCCTGAAGA TTATCCGTGC GCGTGTTGCG 
GACCATTTTG CACAAATTGC TCAAGATGAG CAAGATGCTG AGCGTAAATC TACGGTTGGT 
ACAGGGGATC GTTCAGAGCG TATCCGTACT TATAATTTTC CACAGAACCG TGTCACAGAC 
CACCGTATTG GTTTGACTCT TCAAAAATTA GATACGATTT TGGCTGGCAA AATGGATGAA 
GTTATCGATG CTTTGGTTCT TTACGATCAA ACACAAAAAT TGGAAGAGCT TAACAAATGA 

 

Protein sequence

MNIYDQLQAV EDRYEELGEL LSDPEVVSDT KRFMELSREE ANTRETVIAY REYKQVIQNI 
SDAEEMIKEA SGDADLEEMA KEELKKSKAA KEEYEERLKI LLLPKDPNDD KNIILEIRGA 
AGGDEAALFA GDLLAMYQKY AETQGWRFEV MEASYNGVGG IKEVVAMVSG ESVYSKLKYE 
SGAHRVQRVP VTESQGRVHT STATVLVMPE VEEMEYEIDP KDLRVDIYHA SGAGGQNVNK 
VATAVRMVHI PTGIKVEMQE ERTQQKNRDK ALKIIRARVA DHFAQIAQDE QDAERKSTVG 
TGDRSERIRT YNFPQNRVTD HRIGLTLQKL DTILAGKMDE VIDALVLYDQ TQKLEELNK