| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | STER_0406 |
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| Symbol | |
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| ID | 4436726 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Streptococcus thermophilus LMD-9 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008532 |
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| Strand | + |
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| Start bp | 356461 |
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| End bp | 357780 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 639676133 |
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| Product | superfamily II DNA/RNA helicase |
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| Protein accession | YP_819900 |
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| Protein GI | 116627281 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4098] Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.329953 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATACCTA AAGAATATTA TGGACGACTA TTTACGAAAG AACAGTTACC AGTGGATTAT
CTCTCAGAGG CTGTAAAATT AGAAAGTATG ATAAAGGTTG ATAAAAAACT TAGATGTAAA
AGATGTTATA GTCGAATAGA GGAAGATTGG CAATTACCGA ATGGTCAGTA TTATTGTAGA
GCGTGTATTG TCTTTGGTCG AAACCAAGAA GGAAAAGAAC TCTATTACTT TCCCTCAGAA
AAATCAGAAG TAGATTTTCC TGTCTTGAAA TGGTCAGGAA AACTGACTCC TTATCAAAAT
GAGGTCTCGG AAAAGCTTTT AAAGACTTAT AAAAATCAAA AACACAGTCT TGTTCATGCA
GTGACTGGTG CTGGCAAGAC AGAGATGATT TATAATATTG TTGCCTATGT TCTTGAAAAT
AAAAATCGTG TCGTCATCGC AAGTCCCCGA GTTGATGTTT GTCGAGAATT GTTTCTACGC
ATGCAGAAAG ATTTTACTTG TAGTATTTCT CTGCTTCATG CTGATAGTGA ACCATATGAT
GGTAGTCCGC TCGTTATAGC TACCACTCAT CAATTACTAA AATTTTATCA TAGCTTTGAC
TTGATTATTG TTGACGAAGT TGATGCCTTT CCATTTGTAG GGAATGTCAT GTTAAATCAT
GCTGTTAAAC AGGCAAAGAC GGAAACAGGC CGGTATATTT ACTTGACAGC AACTTCTACA
TTAGCTTTAG AAGAGCAAGT GCGCCTTGGA GCTATAGAAA AGCATCACCT TGCTAGTCGT
TTCCACGGAA ATCCTCTAGT CCTTCCTCGT TTCTTTTGGC AAGGAAGGTT ACAAAAGTCG
TTGACGAGCG AGAAGCTTCC AAGGCCTCTA ATTCACCAGA TTAAGAAGCA GCGTAAATCA
AATTTTCCTC TATTAATCTT TTTCCCCAAT ATAGCATTAG GTGAAAAGTT TAGTATTACC
CTAAAAAAAT ATCTCCCTAC TGAAAACATA GCCTTTGTTT CATCAAAAAG CGAGGAGCGT
TCAACCATCG TAGAGAAATT CCGAAAAAAA GAATTGACAA TCTTAGTGAC GACAACTATT
CTCGAACGTG GTGTTACCTT TCCACAAGTA GATGTTTTTG TTTGTATGGC AAATCATCAC
TTATATACTA GTTCGAGTCT TATTCAGATT GGTGGTAGGG TGGGGCGTTC GCCCGAGAGA
CCTACAGGGA AACTCTATTT CTTTCATGAA GGATTATCTA AATCAATGTT GCAATGTCGG
AAAGAAATAA ATGCAATGAA TAAAAAAGGA GGGTTTGAAA ATGAAGTGTC TACTATGTAA
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| Protein sequence | MIPKEYYGRL FTKEQLPVDY LSEAVKLESM IKVDKKLRCK RCYSRIEEDW QLPNGQYYCR
ACIVFGRNQE GKELYYFPSE KSEVDFPVLK WSGKLTPYQN EVSEKLLKTY KNQKHSLVHA
VTGAGKTEMI YNIVAYVLEN KNRVVIASPR VDVCRELFLR MQKDFTCSIS LLHADSEPYD
GSPLVIATTH QLLKFYHSFD LIIVDEVDAF PFVGNVMLNH AVKQAKTETG RYIYLTATST
LALEEQVRLG AIEKHHLASR FHGNPLVLPR FFWQGRLQKS LTSEKLPRPL IHQIKKQRKS
NFPLLIFFPN IALGEKFSIT LKKYLPTENI AFVSSKSEER STIVEKFRKK ELTILVTTTI
LERGVTFPQV DVFVCMANHH LYTSSSLIQI GGRVGRSPER PTGKLYFFHE GLSKSMLQCR
KEINAMNKKG GFENEVSTM
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