| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | STER_0375 |
|---|
| Symbol | |
|---|
| ID | 4437932 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptococcus thermophilus LMD-9 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008532 |
|---|
| Strand | + |
|---|
| Start bp | 327980 |
|---|
| End bp | 329401 |
|---|
| Gene Length | 1422 bp |
|---|
| Protein Length | 473 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 639676105 |
|---|
| Product | xanthine/uracil/vitamin C permease |
|---|
| Protein accession | YP_819872 |
|---|
| Protein GI | 116627253 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2252] Permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0283882 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAAGA TTTTCAAATT GAAAGAACAT GGTACTGACG TCCGCACAGA AGTGACTGCC
GGATTGACAA CTTTCTTTGC CATGTCTTAC ATCCTCTTTG TTAACCCAGC GATGTTGGCC
CAAACAGGAA TGCCTGCACA AGGTGTTTTC TTAGCAACAA TTATTGGTGC GGTTGCAGGG
ACGTTGATGA TGGCATTTTA TGCTAACCTA CCATACGCCC AAGCGCCTGG TATGGGGCTT
AATGCCTTCT TCACCTACAC AGTGGTTTTT TCTTTGGGTT ACACTTGGCA AGAGGCCTTA
GCAATGGTCT TTCTATGTGG TGTTATTTCA TTAATCATCA CGGTAACGAA AGTACGTAAG
ATGATTATTG AGTCTATCCC AACAGCTCTT AAATCTGCTA TTTCAGCAGG TATCGGTGTT
TTCCTTGCCT ATGTTGGGAT TAAAAATGCT GGTTTCTTGA AATTCTCAAT TAATCCACAT
ACCTATACTG TAGCAGGTAA AGGTGCTGAT ATGGCCAAGG CTTCAATTAC GGCTTCATCG
TCAGCTACAC CAGGTTTGGT TGCCTTCAAT AACCCAACTG TAATTGTAGG TTTGATTGGT
CTTGCGATTG CGATTTTCTT TATTGTTAAA GGTATTCGTG GAGGTGTTCT CCTTTCAATC
CTTGTAACGA CTATCATTGC TATTTTTGCT GGTGTCGTTG ATCTTGGAAA CATTGACTGG
CACGCAGCTA GCTTGACATC ATCTATTAAA GATCTTGGTA AGGTCTTTGG TGCAGCGCTT
GGATCTAAGG GATTGGGATT GCTCTTTGCA GATGTTTCTC GTTTGCCTGG TGTCTTTATG
GCTATTCTTG CCTTTTCATT GACTGATATC TTCGATACTA TCGGTACCTT GATTGGTACT
GGTGAGAAGG TTGGTATCAT TGCTTCAACA GGTGATAACA ACGAATCAAA AGCTCTTGAC
CGTGCTCTTT ACTCTGACCT TGTCGGTACA AGTATTGGTG CCATTGCAGG GACTTCAAAT
GTTACAACTT ACGTTGAATC TGCAGCAGGT ATTGGTGCTG GTGGACGTAC TGGTTTGACA
GCTCTTGTGG TTGCTGTACT CTTTGCCATC TCTAGTTTCT TTAGTCCAGT GGTATCAATC
GTTCCTAATG CTGCCACAGC GCCTATCCTT ATTATTGTAG GTGTTATGAT GCTCTCTAAC
CTTAAGAGTG TCGATTGGGA AGACTTGTCT GAAGCTATTC CTGCCTTCTT CACTTCTATT
TTCATGGGAT TCTCATATAG CATTACCTAT GGTATCGCAG CTGGTTTCCT TACTTATACT
TTGGTCAAAG TCGTCAAAGG TCAAGCTAAG GATGTCCACT TTATTATGTG GATTTTGGAT
ATCTTGTTTA TCCTTAACTT CATCAGTATG GCTGTGTTCT AA
|
|---|
| Protein sequence | MEKIFKLKEH GTDVRTEVTA GLTTFFAMSY ILFVNPAMLA QTGMPAQGVF LATIIGAVAG
TLMMAFYANL PYAQAPGMGL NAFFTYTVVF SLGYTWQEAL AMVFLCGVIS LIITVTKVRK
MIIESIPTAL KSAISAGIGV FLAYVGIKNA GFLKFSINPH TYTVAGKGAD MAKASITASS
SATPGLVAFN NPTVIVGLIG LAIAIFFIVK GIRGGVLLSI LVTTIIAIFA GVVDLGNIDW
HAASLTSSIK DLGKVFGAAL GSKGLGLLFA DVSRLPGVFM AILAFSLTDI FDTIGTLIGT
GEKVGIIAST GDNNESKALD RALYSDLVGT SIGAIAGTSN VTTYVESAAG IGAGGRTGLT
ALVVAVLFAI SSFFSPVVSI VPNAATAPIL IIVGVMMLSN LKSVDWEDLS EAIPAFFTSI
FMGFSYSITY GIAAGFLTYT LVKVVKGQAK DVHFIMWILD ILFILNFISM AVF
|
|---|
| |