Gene STER_0339 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSTER_0339 
Symbol 
ID4438199 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptococcus thermophilus LMD-9 
KingdomBacteria 
Replicon accessionNC_008532 
Strand
Start bp293224 
End bp294072 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content35% 
IMG OID639676072 
Productamino acid ABC transporter periplasmic protein 
Protein accessionYP_819839 
Protein GI116627220 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTTA AAAAAATTCT TGGAATTACG GGTGTAGCCA TTGCTTCAGT GGCTTTGCTT 
GCTGCATGTT CATCTAAATC ACCAAAAGAA GCATCTAAAT CTTCAGGTGC TAAAGAAACA
ATTAACTTTG CCACTGTTGG GACAACAGCA CCGTTCTCAT ATGAAGAAAA CGGGGAATTG
ACTGGTTACG ATGTGGAAGT GGCTAAAGCA GTCTTCAAAG ACTCTGACAA ATATGAAGTG
AAATTCCAAA AAACAGAATG GTCTTCAGTC TTCACAGGTC TTGACTCAGC TAAATACCAA
ATGGCTGGGA ACAATATCTC TTATTCAGAA GAACGTGCCC AAAAATATCT CTTCTCATAT
CCAATTGGTA CCACACCAGC TGTTTTGACT GTTCCAAAAG ATAGTAATAT TAAGAAATAT
GATGATATTG CTGGACACTC AACGCAGGTT GTTCAAGGAA CAACGACAGC TACTCAATTG
ACAGAGTTTA ATGATAAACA TTCAGACAAG CCAGTTGAAC TTAACTACAC AAATGAAAAT
ATTACACAAA TGTTGACAAG TTTGAATGAA GGCAAGTATG ACTTCAAGAT CTTTGATGCA
CCAACTGTTA ATGCAATCAT CAAAAACAAT AAATTGAGCA ACTTGAAGAC TATTGAGCTT
AAATCTGATG AACAACCATA CATCTACTTC TTGTTCGCAG ATAATCAAAA AGATCTTCAA
AAATTTGTAA ACAAACGTTT GGAAGAACTC CAAAAAGATG GTACTTTGGC TAAGTTGGCT
GAAAAATTCC TTGGAAATAA AGATTATATT CCAACTAAAG ATGCTTTGAA AGTTCCAAGC
AAAAAATAA
 
Protein sequence
MKLKKILGIT GVAIASVALL AACSSKSPKE ASKSSGAKET INFATVGTTA PFSYEENGEL 
TGYDVEVAKA VFKDSDKYEV KFQKTEWSSV FTGLDSAKYQ MAGNNISYSE ERAQKYLFSY
PIGTTPAVLT VPKDSNIKKY DDIAGHSTQV VQGTTTATQL TEFNDKHSDK PVELNYTNEN
ITQMLTSLNE GKYDFKIFDA PTVNAIIKNN KLSNLKTIEL KSDEQPYIYF LFADNQKDLQ
KFVNKRLEEL QKDGTLAKLA EKFLGNKDYI PTKDALKVPS KK