Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | STER_0333 |
Symbol | |
ID | 4436949 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptococcus thermophilus LMD-9 |
Kingdom | Bacteria |
Replicon accession | NC_008532 |
Strand | + |
Start bp | 285713 |
End bp | 286561 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 639676066 |
Product | amino acid ABC transporter periplasmic protein |
Protein accession | YP_819833 |
Protein GI | 116627214 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0209533 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACTTA AAAAAATTCT TGGAATTACG GGTGTAGCCA TTGCTTCAGT GGCTTTGCTT GCTGCATGTT CATCTAAATC ACCAAAAGAA GCATCTAAAT CTTCAGGTGC TAAAGAAACA ATTAACTTTG CCACTGTTGG GATAACAGCA CCGTTCTCAT ATGAAGAAAA CGGTGAATTG ACTGGTTACG ATGTGGAAGT GGCTAAAGCA GTCTTCAAAA ACTCTGACAA ATATGAAGTG AAATTCCAAA AAACAGAATG GTCTTCAGTA TTTACAGGTC TTGACTCAGC TAAATACCAA ATGGCTGGGA ACAATATCTC TTATTCAGAA GAACGTGCCC AAAAATATCT CTTCTCATAT CCAATTGCTA CCACACCAGC TGTTTTGACT GTTCCAAAAG ATAGTAATAT TAAGAAATAT GATGATATTG CTGGACACTC AACGCAGGTT GTTCAAGGAA CATCGACAGT TACTCAATTG ACAGAGTTTA ATGATAAACA TTCAGACAAG CCAGTTGAAC TTAACTACAC AAATGAAAAT ATTGAACAAA TGTTGACAAA TTTGAATGAA GGCAAATATG ACTTCAAGAT CTTTGAAGCA CAAACTGTTA ATGCAATCAT CAAAAACAAT AAATTGAGCA ACTTGAAGAC TATTGAGCTT AAATCTGATG AACAACCATA CATCTACTTC TTGTTCGCAG ATAATCAAAA AGATCTTCAA AAATTTGTAA ACAAACGTTT GGAAGAACTC CAAAAAGATG GTACTTTGGC TAAGTTGGCT GAAAAATTCT TTGGAAATAA AGATTATATT CCAACTAAAG ACGCTTTGAA AGTTCCAAGT AAAAAATAA
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Protein sequence | MKLKKILGIT GVAIASVALL AACSSKSPKE ASKSSGAKET INFATVGITA PFSYEENGEL TGYDVEVAKA VFKNSDKYEV KFQKTEWSSV FTGLDSAKYQ MAGNNISYSE ERAQKYLFSY PIATTPAVLT VPKDSNIKKY DDIAGHSTQV VQGTSTVTQL TEFNDKHSDK PVELNYTNEN IEQMLTNLNE GKYDFKIFEA QTVNAIIKNN KLSNLKTIEL KSDEQPYIYF LFADNQKDLQ KFVNKRLEEL QKDGTLAKLA EKFFGNKDYI PTKDALKVPS KK
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