Gene STER_0333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSTER_0333 
Symbol 
ID4436949 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptococcus thermophilus LMD-9 
KingdomBacteria 
Replicon accessionNC_008532 
Strand
Start bp285713 
End bp286561 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content34% 
IMG OID639676066 
Productamino acid ABC transporter periplasmic protein 
Protein accessionYP_819833 
Protein GI116627214 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0209533 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTTA AAAAAATTCT TGGAATTACG GGTGTAGCCA TTGCTTCAGT GGCTTTGCTT 
GCTGCATGTT CATCTAAATC ACCAAAAGAA GCATCTAAAT CTTCAGGTGC TAAAGAAACA
ATTAACTTTG CCACTGTTGG GATAACAGCA CCGTTCTCAT ATGAAGAAAA CGGTGAATTG
ACTGGTTACG ATGTGGAAGT GGCTAAAGCA GTCTTCAAAA ACTCTGACAA ATATGAAGTG
AAATTCCAAA AAACAGAATG GTCTTCAGTA TTTACAGGTC TTGACTCAGC TAAATACCAA
ATGGCTGGGA ACAATATCTC TTATTCAGAA GAACGTGCCC AAAAATATCT CTTCTCATAT
CCAATTGCTA CCACACCAGC TGTTTTGACT GTTCCAAAAG ATAGTAATAT TAAGAAATAT
GATGATATTG CTGGACACTC AACGCAGGTT GTTCAAGGAA CATCGACAGT TACTCAATTG
ACAGAGTTTA ATGATAAACA TTCAGACAAG CCAGTTGAAC TTAACTACAC AAATGAAAAT
ATTGAACAAA TGTTGACAAA TTTGAATGAA GGCAAATATG ACTTCAAGAT CTTTGAAGCA
CAAACTGTTA ATGCAATCAT CAAAAACAAT AAATTGAGCA ACTTGAAGAC TATTGAGCTT
AAATCTGATG AACAACCATA CATCTACTTC TTGTTCGCAG ATAATCAAAA AGATCTTCAA
AAATTTGTAA ACAAACGTTT GGAAGAACTC CAAAAAGATG GTACTTTGGC TAAGTTGGCT
GAAAAATTCT TTGGAAATAA AGATTATATT CCAACTAAAG ACGCTTTGAA AGTTCCAAGT
AAAAAATAA
 
Protein sequence
MKLKKILGIT GVAIASVALL AACSSKSPKE ASKSSGAKET INFATVGITA PFSYEENGEL 
TGYDVEVAKA VFKNSDKYEV KFQKTEWSSV FTGLDSAKYQ MAGNNISYSE ERAQKYLFSY
PIATTPAVLT VPKDSNIKKY DDIAGHSTQV VQGTSTVTQL TEFNDKHSDK PVELNYTNEN
IEQMLTNLNE GKYDFKIFEA QTVNAIIKNN KLSNLKTIEL KSDEQPYIYF LFADNQKDLQ
KFVNKRLEEL QKDGTLAKLA EKFFGNKDYI PTKDALKVPS KK