Gene LEUM_1938 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLEUM_1938 
Symbol 
ID4423881 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeuconostoc mesenteroides subsp. mesenteroides ATCC 8293 
KingdomBacteria 
Replicon accessionNC_008531 
Strand
Start bp1907936 
End bp1909717 
Gene Length1782 bp 
Protein Length593 aa 
Translation table11 
GC content39% 
IMG OID639675633 
ProductABC-type multidrug transport system, ATPase and permease component 
Protein accessionYP_819382 
Protein GI116619011 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTATTT TTGGCAAATT AATGTGGTTC TTTAAAGAGC ACAAACGACT ATATATGTTG 
GGGCTCACTT TTTTGTTTCT GACAGAAGTA TCACAAATGG TGTCCCCAGC GTTAATCGGT
CGTTTCACTG ATGTGATAGT ATCCCGACAA ATGACGATGC ATCAGCTATT TTTCTATGCT
GGTGGTATTT TGCTTTTTTC TGTGTTGATG TACATATTTC GTTATACGTG GATTACACAT
ATTTTCCAAG GTTCGGCACT ATTAGAAAAA ACATTGCGGC AACAATTGTT TGATCACTAT
TTGAAAATGG ATACTACATT TTATCAGCGT CGACGTACGG GAGATTTAAT GGCACATGCG
ACGAACGATT TGTCAGCAGT GCAGAGAGTG GCATCTGGTG GCGTACTGAT GCTAGTTGAT
TCGATTGTTA TTATTATTTT TACGGTTATT TCAATGACCC TTGTGGTTGA TTGGCGTTTG
ACGTTGATTG GTGTTTTACC TTTACCATTA TTGGCGGCCG GTGTTTGGTA TTTATCACCT
AAAATGCGAC GTGCATTCAC ATCATCTCAA GAAGCCTTTT CACGATTATC AAACAAGTCT
CAAGAATCGA TAGCTGGAAT TAAAGCTATT AAAACATTGG GGCAAGAAAA ACAAGATGTT
GATGCTTTTG ATGAGGAAAT ACAAAAGACG ATTCAGATCA ATAAAAAGGT AGCCGCCATT
GACTCCTTGT TTGGACCAAT GGCTACGCTG GTGATGACAA TTAGTTATGT TGTGATGATT
ACTTATGGTG GGTCGTTGGT ATTGAATGAT TCAATTTCAA TCGGGCAGCT TGTCTCATTT
TCAACTTATT TAGGGTTACT TGTATGGCCG ATGTTTGGTT TAGGGCAGTT GTTTAACGTA
TTGGAACGTG GTAATGCTTC ATATATGCGT GTCCAAGAAA TTTTATCTGA AAAATCATCA
ATTGTTGAAG ATGAGCAGGG ATATGATAGC ATATCACATG GTGATGTTGC TATTCGGATT
GATCAGTTTA AATATCCAGA TGATCAATCG GAAGTTTTGA AAGATATTTC ATTGAATATT
CGTGCTGGCG AAACTGTCGG TATTGTTGGG CGTGTTGGTG CTGGTAAAAC AACCTTAATC
AAGCTGTTGC TGCGCCAGTT TGATGGTTAT ACTGGTCAAA TTAGTTTTGC TGGTAAAAAC
ATTAAAGATT ATAAATTAAG TGCGTATCAC AGAGCGATTG GCTATGTTGC GCAGGAAAAT
TTTTTGTTTT CAACAACAGT AAGAGATAAT ATCCGGTTTG CTGATGTCAA TAAATCACAA
GAGGAAGTGG AAAATGCTGC TAAAATGGCG GCCTTACATG AAGATATCCT GAACTTTCCG
GAGGGATACG ATACACAAGT TGGCGAACAT GGTGTAAGTT TATCGGGCGG TCAGAAGCAG
CGATTGGCTA TAGCTCGTGC CTTAATTATC GATCCAGAAA TTTTAATTTT AGATGATGCT
TTGTCGGCCG TCGACGCACG GACGGAAAAA CAAATATTGC ATACTTTAAA AACTACCCGG
CAAGAGAAAA CAACGGTTAT TGTTGCTCAC AGAATTAGTT CCGTGATGAA TGCTAATGAA
ATTGTAGTCT TTGACCACGG TGAAATTGCT GAACGTGGTC GACATGAAGA ACTGATTGCG
CAACAAGGAT GGTATGCCCA AATGTATGAG CAACAACAAT TAGCAACAAC GTTTCAACAA
AACTTAGAGG GAAAGGGGGA TGATGATGAC AGAAAAAAAT AA
 
Protein sequence
MTIFGKLMWF FKEHKRLYML GLTFLFLTEV SQMVSPALIG RFTDVIVSRQ MTMHQLFFYA 
GGILLFSVLM YIFRYTWITH IFQGSALLEK TLRQQLFDHY LKMDTTFYQR RRTGDLMAHA
TNDLSAVQRV ASGGVLMLVD SIVIIIFTVI SMTLVVDWRL TLIGVLPLPL LAAGVWYLSP
KMRRAFTSSQ EAFSRLSNKS QESIAGIKAI KTLGQEKQDV DAFDEEIQKT IQINKKVAAI
DSLFGPMATL VMTISYVVMI TYGGSLVLND SISIGQLVSF STYLGLLVWP MFGLGQLFNV
LERGNASYMR VQEILSEKSS IVEDEQGYDS ISHGDVAIRI DQFKYPDDQS EVLKDISLNI
RAGETVGIVG RVGAGKTTLI KLLLRQFDGY TGQISFAGKN IKDYKLSAYH RAIGYVAQEN
FLFSTTVRDN IRFADVNKSQ EEVENAAKMA ALHEDILNFP EGYDTQVGEH GVSLSGGQKQ
RLAIARALII DPEILILDDA LSAVDARTEK QILHTLKTTR QEKTTVIVAH RISSVMNANE
IVVFDHGEIA ERGRHEELIA QQGWYAQMYE QQQLATTFQQ NLEGKGDDDD RKK