| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LEUM_1112 |
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| Symbol | |
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| ID | 4422874 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008531 |
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| Strand | + |
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| Start bp | 1108593 |
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| End bp | 1111613 |
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| Gene Length | 3021 bp |
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| Protein Length | 1006 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 639674811 |
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| Product | Type IV secretory pathway, VirD4 component |
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| Protein accession | YP_818585 |
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| Protein GI | 116618214 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCTAT TTAAAAAAGA TTATCGTGCC GAAAGACAAT TCATGCGCGA AAGTTACATT
CGTTGGCGTG GTCGTCCCTG GTTCTTGTGG TTGTATGGCA TTATAGCAAC TATTGGTGTG
ATATTTATAT CGCTTTACGT CACGATTATT GTTGACTTGT TAATAAGAGT GGTTGGCCCA
TATATTCAAG CCTTCAAGTT TTATATGCAA AGTGGTGTTG CTCATTGGCC TGAATTCAAT
GATGTCATGA ACATGACCGC GACTGTGCTC AATCCACTCA ATATTTTCAC TATTCTGTCT
CGACTAACTT TAGTGACAAG CATTGTACTA ATCCTTTGCT TGTTACTCCT ACTCAAAAAA
TATGTCTTCC AACGCATCTA TGACTGGTAT CAATTGTTTA GAGACCAAAC GCGTAATACT
AACCGTTTTG CGGAAGTCCG TGAAGTGGAT AAGGTTTACA AATTGATTCC TGATCGCAAT
AAGAATTTTA AGGGTCACCC AGGACAACCA GTGCTGCACA CACAAGGATA CACCTTCGAA
TTCTTTATGA TTCATCCGTT CCTGTGGGCG TGGCAATGGT TTAAGCGGCC ACTAGGTATG
AATTCACTAG AATTTAGCGG GGTGTACAAA AAAATACGTC CCGTTTTACT GGAACGTTTG
CCAAAGCTAT TTGAAAAGCA ACTGAATGTT CAAGGCGGTT TTGATGGTTT TTATTGGGTG
GATACCAGTA ACACCCATTC AAAGACAACT GGGATGACGC GTTCTTCAAA AGACCAAATG
CGAGGCTATA CCTTAATTGA CATCATTTGT CGTGCCGAAA TCAAATGGAA CATTATTGAT
ACTGATGCCA AAAACGAAGA TGCCAAAATG AGTTACAAGT CATTACGCAC AGCAGGTTAT
GACGTGAAAT TACTCAATAT CATGGAGCCA AGTGAGTCTG AGTCCTGGAA TCCTCTTGAA
ATTGCGATTG ATTATGCCTT TGATGGGGAT TGGGACAGTG CCAATACGGA ATTGCGTAAG
GTTGTACAAG TCATTGGTGG ATCAAGTGGT GAAGAAAGTA GTCACAAAGA TATTTGGGAT
AGTGCCGCTG AAAGTACCAT CCAGGCAGTC ATGCTCACGG TGCTAGATAT TTCTGTACGT
CACCAGGACA AATCAATGGT GACCATCTCA AACGTCCTGC AATTCATCAA TGATATGAAC
AAGTTCACGG ATAAAGAAGG TGATGGCTTA ACTAAGTACA TTACTAACAT TGGTAAACTA
CCGCGAACAC CAGCGCGCAA TATGATTATT CTAAACGCCG CTGAGTACCT ATCTGCCACA
GGGGATACCA AATCATCAAT TTCTTTCTCA GTTATGAATC GTTTGAATTT GTTTGCCTCA
GAGTCAATCA CACGTTTGAC AACCTTCAAC ACTATCAATT TGACCGATTT AGGGTTTCCA
AGAATGCTAA AGATTAAGTT CTCTGCCTGT TATAAAGGCG TCCATGTGAG CATTCATGTT
TATGAATCAG GTAAAAAGCA TGCAATAGAA AAGGACAAGC TAACTGTGTC CCAATCAGGC
ACGCTAACTT ATCCGATTCA TAACCATTTA CCCGTCTCAT GGCAAATTGA GTTGTCACTC
GATAATGATG GCAATTCAAT TGCGATGCGT AAACAGTCGT TTACGTTGAC TGGTAAGATT
GTACAACGAA AATTACTCAA TGGCAAGATT AAGCGTGACT TGTTTTCTAA GCAGCCTGTC
ATCCAATGCC TGGTTGATCA GATTAAACCA CAAGGCACTA CTGAGACACC AGGTGTCAAC
TTGCGTTACT CAGAAAATCC AATGGCAGTC TTCATCATCA CGCCACAATC TAACGATGAT
TTTTCCGCTT TGGCCAGCTT GTTTATCTCA CAAGTTTTCT CAGTCAATAC GGACATTGCA
TCAACGATTA CCCGCAGGAA AATGGACAGT TGGATACTTT ATAAGCTCAA TGAGTTTTCT
ATGTTCCCAC GTATTCCAGG CTTCACCAAC ATTCTAACGC GTGGTTTAAC CTATGGGCAT
TTGGTTGATT TGTATATTCA AACCTTAACA CAACCACGAT TGCATTATTC TGAAATGGAA
ACCAATGACA TCAATGGTAA CACGGGTAAC TGGTTCCACA TTTTAACTAA TGATGAGCAA
ACGAATGAAG CCTTATCCAA GCAATTAGGT GAGGTTGAAG TCCAAACCGA ATCAGTCAAT
TCACAGATTG GGTTAGATCG TCAAGATCGT GGTAATCGCC ATGCACAAGT TAGCAAGGTT
CGGCTGTTGG ATGCCAAAGA AATTAGTGAA TTGAGTCCTC GTGAAATGAT TACCATCCGT
ACGATCAAAC GTGCTGATAA GAAGGGGCGT TCTGTTCGCC CTTTGCCAAT TTTCTCTACG
GGTGCTTACC GAATGCCGTT TGCCTATGAA TTATTGGGTA AGCAGTATTC ACTTGATTAC
TATACGGCAG ACTTGAACAT CAAAGCGCAG CATAACGATT TGAAATATGA TGACCTCTAT
CATGACTTTG TGCCTTACTT TGATGAACTT GATCAACAAG TCCAACTAGA AATTGAGGAA
GACGGCGCAA GTGGCAATCA AATTGATAAT CGTCAAATCA ATACGTTAGC TGATGATGAA
ATCAACAACA TTTTGGCCAA AGCGCATCAA GGTATCGAAA CAGCCACAGT GCAAACACAA
CAAGAACTCT CTGATGAGGA ACGTTACTTA AAGTGGAAAC ATGACTTTAA CCCTGATGAG
CCTTTTATGA CCGAAGAACA ACTAGACAAT GTTGAGCTAC GTCAAATTGT AGAGAAATCC
ATCAAAATGA GGATACCACG CTCAAATAAG ACCGAAGAAC AAAACAGTGC CGTTGCTTAC
TTAAATCGTG GCAAATATTT GACACTTTCT GGCAACAACA ATAACGGTAA AGTTCTAAGA
TTACTAAACA ACGAACCCGC ATACATGTGG GAAATTTATA AGCAGCTCAA CGCTGCAACA
ATTCAAGGAG AAGTCGAATG A
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| Protein sequence | MKLFKKDYRA ERQFMRESYI RWRGRPWFLW LYGIIATIGV IFISLYVTII VDLLIRVVGP
YIQAFKFYMQ SGVAHWPEFN DVMNMTATVL NPLNIFTILS RLTLVTSIVL ILCLLLLLKK
YVFQRIYDWY QLFRDQTRNT NRFAEVREVD KVYKLIPDRN KNFKGHPGQP VLHTQGYTFE
FFMIHPFLWA WQWFKRPLGM NSLEFSGVYK KIRPVLLERL PKLFEKQLNV QGGFDGFYWV
DTSNTHSKTT GMTRSSKDQM RGYTLIDIIC RAEIKWNIID TDAKNEDAKM SYKSLRTAGY
DVKLLNIMEP SESESWNPLE IAIDYAFDGD WDSANTELRK VVQVIGGSSG EESSHKDIWD
SAAESTIQAV MLTVLDISVR HQDKSMVTIS NVLQFINDMN KFTDKEGDGL TKYITNIGKL
PRTPARNMII LNAAEYLSAT GDTKSSISFS VMNRLNLFAS ESITRLTTFN TINLTDLGFP
RMLKIKFSAC YKGVHVSIHV YESGKKHAIE KDKLTVSQSG TLTYPIHNHL PVSWQIELSL
DNDGNSIAMR KQSFTLTGKI VQRKLLNGKI KRDLFSKQPV IQCLVDQIKP QGTTETPGVN
LRYSENPMAV FIITPQSNDD FSALASLFIS QVFSVNTDIA STITRRKMDS WILYKLNEFS
MFPRIPGFTN ILTRGLTYGH LVDLYIQTLT QPRLHYSEME TNDINGNTGN WFHILTNDEQ
TNEALSKQLG EVEVQTESVN SQIGLDRQDR GNRHAQVSKV RLLDAKEISE LSPREMITIR
TIKRADKKGR SVRPLPIFST GAYRMPFAYE LLGKQYSLDY YTADLNIKAQ HNDLKYDDLY
HDFVPYFDEL DQQVQLEIEE DGASGNQIDN RQINTLADDE INNILAKAHQ GIETATVQTQ
QELSDEERYL KWKHDFNPDE PFMTEEQLDN VELRQIVEKS IKMRIPRSNK TEEQNSAVAY
LNRGKYLTLS GNNNNGKVLR LLNNEPAYMW EIYKQLNAAT IQGEVE
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