| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LEUM_0885 |
|---|
| Symbol | |
|---|
| ID | 4422682 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008531 |
|---|
| Strand | + |
|---|
| Start bp | 881613 |
|---|
| End bp | 883865 |
|---|
| Gene Length | 2253 bp |
|---|
| Protein Length | 750 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 639674592 |
|---|
| Product | excinuclease ATPase subunit |
|---|
| Protein accession | YP_818366 |
|---|
| Protein GI | 116617995 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0178] Excinuclease ATPase subunit |
|---|
| TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.987216 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGGTAACA ATGAATGGAT TGGCATCGAC AATGCGCATC AAAATAATTT AAAAAACATT
TCGGTCAAAA TTCCAAAACA CCAGTTAACC GTTTTTACAG GTGTATCTGG TTCGGGAAAG
TCAACCTTAG TTTTTGACAC TTTAGTTGCG CAGTCAAGAC GTGAATTAAA TGATACGTTC
TCGAGTTATG TGCAACATAT TTTACCAAAA TATGGTAGAC CGGCTGTAGA TAACATTACT
AATTTGCCAA TAGCAATACC AATTGAGCAA CGAAAAATGT CGGGCAACGT TAGATCAACA
GTAGGAACGT ATACTGAAAT ATACACATTC TTGCGTTTGC TGTTTTCTCG AATAGGACAA
CCCTTTGTTG GTTATTCAGA TGCCTTTTCT TTCAATCATC CCCAAGGCAA ATGTGAAGTT
TGTGATGGCT TAGGTTTTAC TAAAAAAATT AATTTAACAT ATCTTGTTGA TTTTAATCAA
TCACTTAATG AAGATCCAAT TGATTTTCCA ACTTTTGGAA ATGGTGCTTG GCGTTGGAAA
CGTTATGCCT ATAGCGGCTT ATTTGATTTG AATAAAAAAA TAAAGGATTA TTCTAAAGAA
GAACTAGATT TATTGTTATA CGCACCACAG CAAAAACTAG CGTCTCCTCC TGAAAAATGG
CCAAAAACTG CCTTATATGA GGGTTTGTTA CCGAGAATTA AGCGAAGTAT TATTAATACT
GATGAGGGGA AAAGGCATAG AAAGCAACTT GAAAAGTTTG TATCCACTGA TATTTGTCCA
ACTTGTCAGG GCTCCAGATT GAATGCAAAG GCGCTAAGTT GCAAAATTGA TGGGCATAAT
ATCAGTGATT TAGTTGCAAT GTCATTGGAT GAATTACAAT TATTAATTCA AAAAATAAGA
AATCCACTGG TTCAGGATGT TAAAACACAG ATTGATAAAC GCCTAAATGC TTTGATTACG
ATTGGTTTAG GCTATCTTAA TTTAGCGCGA AGTACAGATA CGCTATCGGG CGGCGAAGCG
CAAAGAATCA GAATTGCTAA GCATATCACA AGCTCTTTAA ATGATGTGAT GTATGTCCTA
GACGAACCTA GCTCAGGCCT ACATCCAAAA GATATTGAAC GACTATATAA ATGTTTGTGT
GTCTTAAAGA ATCAAGGCAA TACGATTATT TTAGTGGAAC ATAACCCACT GCTAATTCAG
CGAGCTGACT ACATCATTGA TGTTGGTCCA GGTCCGGGAG TTAATGGTGG CAGTATTCAA
TTTTCGGGAA CATATGGTGA GTTTTTAAAA AGCGATACGA TTACCAGTGT TGCTATGCGT
GAAAATGAGA GGTTGAATAA TCATACTAAT AGCAGCTTCA AAAAATGGCT GTCTGTTAGA
GATAAAAATT TAAACACAGT ACAAAACGTT TCTTTAAAAA TACCACTTAA TGCTTTGACT
GTTTTATGCG GTGTGGCTGG ATCAGGTAAA TCGTCTCTAG CACAAATAGT AGCGTCAGAA
TTGATTCAAA GAGAAATCGA TGTTATCAAT ATTTCGCAAA AGAACATTGG TATTAGTCTT
AGATCAACTC CACTGACTTA CTTAGATATT TTTGATGATA TTAGGAAACT ATTTGCAAGA
GCAAACTCAG TTAGTCCATC GTTATTTAGT TACAATTCAA AGGGCGCTTG TCCGCGCTGC
AAGGGAAAAG GCGTTATCGT TAATGATATG TATTTTATGG ACGATGTCGT TTCTGAGTGT
GAATTGTGCC ATGGACAACG CTATAATCAG GAAGTTTTGC AATATGGCTA TAAGGATAAG
ACTATTGTTG ACATATTGTC TATGACGGTG AGTCAAGCCG TTAATTTTTT TAGTGGTATT
ACACGAATAG CTACTGGTTT GCAAGCAATC TGTGATGTGG GTCTTGGTTA TTTAAAATTA
AACCAATCTT TGAGTACATT GTCAGGCGGA GAGTTGCAAC GGATCAAGTT ATCGAGCTAC
TTACAAAAGA AGAGTAGTGT TTATATTATT GATGAACCAA CGAATGGGTT ACATTTAAAA
GATATTGATC ATTTGCTTGA GCTTTTCGAT AAGCTGGTTG CTAGAGGAAA CACGATTGTC
ATTATTGAAC ACAGTTTGAA AGTCATTCGA CAGGCTGATT GGCTGATTGA GATGGGTCCT
GAAGGCGGAA AAATGGGTGG TAAAGTTGTT TTTTCCGGTA CAATCGACGA TTTGAAAAAA
TCAAATGATG CAATAACAAA ACCATATTTA TAA
|
|---|
| Protein sequence | MGNNEWIGID NAHQNNLKNI SVKIPKHQLT VFTGVSGSGK STLVFDTLVA QSRRELNDTF
SSYVQHILPK YGRPAVDNIT NLPIAIPIEQ RKMSGNVRST VGTYTEIYTF LRLLFSRIGQ
PFVGYSDAFS FNHPQGKCEV CDGLGFTKKI NLTYLVDFNQ SLNEDPIDFP TFGNGAWRWK
RYAYSGLFDL NKKIKDYSKE ELDLLLYAPQ QKLASPPEKW PKTALYEGLL PRIKRSIINT
DEGKRHRKQL EKFVSTDICP TCQGSRLNAK ALSCKIDGHN ISDLVAMSLD ELQLLIQKIR
NPLVQDVKTQ IDKRLNALIT IGLGYLNLAR STDTLSGGEA QRIRIAKHIT SSLNDVMYVL
DEPSSGLHPK DIERLYKCLC VLKNQGNTII LVEHNPLLIQ RADYIIDVGP GPGVNGGSIQ
FSGTYGEFLK SDTITSVAMR ENERLNNHTN SSFKKWLSVR DKNLNTVQNV SLKIPLNALT
VLCGVAGSGK SSLAQIVASE LIQREIDVIN ISQKNIGISL RSTPLTYLDI FDDIRKLFAR
ANSVSPSLFS YNSKGACPRC KGKGVIVNDM YFMDDVVSEC ELCHGQRYNQ EVLQYGYKDK
TIVDILSMTV SQAVNFFSGI TRIATGLQAI CDVGLGYLKL NQSLSTLSGG ELQRIKLSSY
LQKKSSVYII DEPTNGLHLK DIDHLLELFD KLVARGNTIV IIEHSLKVIR QADWLIEMGP
EGGKMGGKVV FSGTIDDLKK SNDAITKPYL
|
|---|
| |