Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LEUM_0620 |
Symbol | |
ID | 4422453 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
Kingdom | Bacteria |
Replicon accession | NC_008531 |
Strand | + |
Start bp | 588192 |
End bp | 588854 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 639674330 |
Product | peptide ABC transporter ATPase |
Protein accession | YP_818107 |
Protein GI | 116617736 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000156592 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACATTGG CAATAAAAGA TTTAACACAT CAATATAATG CACAGGAAAA GCCACTATAT GAACATATTA ATATGTCATT TGAACCGAAA ACATTGTATA GTATAGTCGG ACAATCTGGT TCTGGTAAAA CAACACTGCT TAGTTTTTTA GCAGGTTTAG ACACACCATC AGAAGGGACG ATTACGCTAG ATGGTGAGAA CATTAGTAAG TATGGATTAA CCAAATACCG GAATCAAAAG GTTGCAATCA TTTTCCAATC ATATAATCTC TTAAATTATA TGACGGCCGC ACAAAATGTA TCATCAGCGT TGTCGATGAC CAAATCAAAG CATACTGGCG ACAAGGATTA TATTTATGCA ACCTTAGAGA AGCTTGGTAT TAACCGTACG TTGGCAGATA AAAATGTTCA GCAGTTGTCA GGTGGTCAGC AACAACGAGT GGCCATTGCA CGAGCTTTGG CTGTGGATGC TAAAATAGTT ATTGCTGATG AGCCAACAGG TAATCTGGAT GAGGAAAATA CACAAGAAGT TATCAAAATT TTCCAAGAAC TGGCACATGA AGTTGGTAAA ACAGTTATTT TGGTTACACA CGAACCCAAT GTGGCTCAAG CAGCCGATGT GCAAATTAGT TTGAAAAATC GTCAGTTCAC AATTGTAGAA TAA
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Protein sequence | MTLAIKDLTH QYNAQEKPLY EHINMSFEPK TLYSIVGQSG SGKTTLLSFL AGLDTPSEGT ITLDGENISK YGLTKYRNQK VAIIFQSYNL LNYMTAAQNV SSALSMTKSK HTGDKDYIYA TLEKLGINRT LADKNVQQLS GGQQQRVAIA RALAVDAKIV IADEPTGNLD EENTQEVIKI FQELAHEVGK TVILVTHEPN VAQAADVQIS LKNRQFTIVE
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