| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1890 |
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| Symbol | |
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| ID | 4438917 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | + |
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| Start bp | 1882452 |
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| End bp | 1883711 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 639673706 |
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| Product | major facilitator superfamily permease |
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| Protein accession | YP_819583 |
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| Protein GI | 116630430 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.000000000000264406 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATATAT TTTTAACTAA TAAAAATTAT CGTAGATTTT CAATTGCTAG TTTTCTTTCT
AGCGCAGGTG ATATTCTTTT CTACTTGGCA TTTATGACTT ATGCAAGTAA ATTAAAAAAC
TATTCTTTAG CACTTTCATT AATTGCCATT TCAGAGTCTT TACCTAAATT ATTTACAATT
TTTGGCGGTT ACTTTGCAGA TAAAACGCAA CATAAATTTA AAAATATATT TTTAAGCGCC
ATTATTCGTT GTGTTTTATA TGGCATCGTT GGACTGCTAT TTATCAGTAA TGTCAATCAA
TGGAGTTTAG TAATTATTGT TGTAACAATT AATTTGATTT CAGATACATT TGGAGCTTAT
TCCAGCGGAT TAGTTTCACC ATTAGTCGTT GATCTAGTAG GAAAAGATCA TTTCGGAGAA
GCAGAGGGCT TTACTAATGG GGTTAATGAA GTTATTAATA TAGCAGCACA GTTTATAGGT
TCAGCATTGC TGCTAATTAT GTCATACTCA TCCCTTGCGT TTTTGAATGC TGTTTCATTT
TTACTTGCTG GAATTTTGTT TGCGAGTGTG GGACTGAGAC AAAAATCTAT TGCGTCGCTT
AAAAGCCATG AAATTAATAC TCAATCTTTT TTGGTAACAA TGAAGGCGTC TTTCAAGCAA
GTTAAAAAGC AGACTGGCCT TTTAGAGGTT GTCCTGATTG TTGCAGTTTT GAATGGATCG
CTAAGTTCAA TGGGATCATT AATTCCAATT ATGATAGCGG CTCATAAAAC AGCAATGGTA
ATTTCAAGAT ATAGTTTTAC GATTGCTTTG ATGGGTGTAG TAGTAGCTTG CGGAGCTGCT
TTGGGAAGTA TGTTTGGTAC GCAGTTGTTT AAGAAATTCA CAATTTTTTC TATGACAATT
CTAGCCACTT TAATCGCTTT AATGACCACT TTTGCGATTT TTGCAACTAG TATCTATCTT
GTTTTAGGAT TGTATTTTTT ATTAGCATTA ACAGCCAGCG CAACTTCAAT CAAATTGACA
CAATGGCTAG TAACGTCCGT CGAGCATAAG ATTTTAGCTT CTACTGTCGG TCTATTAAAC
ACTATTTTGA TTGCGTCTGC TCCCTTGATG ACTACTATTT TAACAACTGT TTCAGGTGCA
ACCAATATAA GATATGCCCT TATTTTGCTT GTAGCTTTAG AAGTAATTAC TTTTTTGGTA
GAACTTAAAG TAAGTCATAA AGTAAAAGTA GCCTCAATCA TATCTTCTGT AAAGGAGTGA
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| Protein sequence | MNIFLTNKNY RRFSIASFLS SAGDILFYLA FMTYASKLKN YSLALSLIAI SESLPKLFTI
FGGYFADKTQ HKFKNIFLSA IIRCVLYGIV GLLFISNVNQ WSLVIIVVTI NLISDTFGAY
SSGLVSPLVV DLVGKDHFGE AEGFTNGVNE VINIAAQFIG SALLLIMSYS SLAFLNAVSF
LLAGILFASV GLRQKSIASL KSHEINTQSF LVTMKASFKQ VKKQTGLLEV VLIVAVLNGS
LSSMGSLIPI MIAAHKTAMV ISRYSFTIAL MGVVVACGAA LGSMFGTQLF KKFTIFSMTI
LATLIALMTT FAIFATSIYL VLGLYFLLAL TASATSIKLT QWLVTSVEHK ILASTVGLLN
TILIASAPLM TTILTTVSGA TNIRYALILL VALEVITFLV ELKVSHKVKV ASIISSVKE
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