| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1875 |
|---|
| Symbol | |
|---|
| ID | 4438937 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus gasseri ATCC 33323 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008530 |
|---|
| Strand | + |
|---|
| Start bp | 1864600 |
|---|
| End bp | 1864887 |
|---|
| Gene Length | 288 bp |
|---|
| Protein Length | 95 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 639673691 |
|---|
| Product | cupredoxin-like domain |
|---|
| Protein accession | YP_819568 |
|---|
| Protein GI | 116630415 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4633] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 48 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.000000000550089 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGTATTT TTTCAAAAAA ACAAACTAAA AAAGTTGTTG TTAATGCAGA AAATCACGGC
TACAAACCAG ATGTAATTAC TTTTAAATCA GGTAAACCCG CACAAGTTAA GTTCATTCCT
TCTGATAACA TGGGCTGTAT GAACGAGATT GTCTTCAAAG ATCTTGGTAT TGACAAGGTT
CTTGACGGTA AAAACGAAGT AGTTGTTAAC ATCCCAACTG ATAAGCCAGG TACTTACAAT
TTTGCCTGCG GAATGGATAT GTTCCATGGA AAGGTCGTTG TTAAATAA
|
|---|
| Protein sequence | MSIFSKKQTK KVVVNAENHG YKPDVITFKS GKPAQVKFIP SDNMGCMNEI VFKDLGIDKV
LDGKNEVVVN IPTDKPGTYN FACGMDMFHG KVVVK
|
|---|
| |