| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1856 |
|---|
| Symbol | |
|---|
| ID | 4439217 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus gasseri ATCC 33323 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008530 |
|---|
| Strand | + |
|---|
| Start bp | 1847702 |
|---|
| End bp | 1848433 |
|---|
| Gene Length | 732 bp |
|---|
| Protein Length | 243 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 639673672 |
|---|
| Product | Beta-lactamase class A |
|---|
| Protein accession | YP_819549 |
|---|
| Protein GI | 116630396 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG2367] Beta-lactamase class A |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.000000412045 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCAACTGG CCAAGATTCA AAAACAAATA GAAAATAATC CTTGGAAAAC AGCAATTACT
ATTCGTAAAA ATAATCAAAC GATTTTTGAA ACTTCAAACG CTAATATGGT TTTTAAATCA
GCTTCATTAA TAAAATTAGG GATTGCTCTT TATATTGAAG AAGAAAAGCC TGATACAATT
GACAATACTC TTAACCTATC TAGTGATGAT ATTGTTGGAG GAGCTGGCAT TATCAATAGG
CTAAGCATTA AATCATGGCA GATTAGTGAT TTATTAGACC TGATGTTATC TGTTTCTGAT
AATACAGCTA CTAATGCTTT ATTGAATTAT TACAACATAA ATACTATTAA TGATTATTTA
CAGCAAAATT TTCCAAACAT TTCTTTAGGT AGATTTTTAA TGAAAAAAAG CACTAAAGAA
AATACTTGTA CAGCAAATTC TATGATGGAC GTTTTTGAAA AGCTGCTTGC AGCCAATAAC
AAAGTTAGTC ATGTAGTTCT CAATGCCTTA AAGCACCAAG AAGTAAGAAA TAAACTAGTA
GCTTACAGCA ATCCTAAGTA TGAAGTCTTC AATAAAACTG GCGAGTTATT ACATGAGCAG
CATGATATAG CACGCTTTAA AGCAAACGCT GATGTGATTG ATTGCTGCGT ATTAACCAAT
TATCAAAGTC AAAAAGATTA TGAAAATATT TTAAATATGA TGCAAAAGAT CGGAAAAATA
CTTACACACT AG
|
|---|
| Protein sequence | MQLAKIQKQI ENNPWKTAIT IRKNNQTIFE TSNANMVFKS ASLIKLGIAL YIEEEKPDTI
DNTLNLSSDD IVGGAGIINR LSIKSWQISD LLDLMLSVSD NTATNALLNY YNINTINDYL
QQNFPNISLG RFLMKKSTKE NTCTANSMMD VFEKLLAANN KVSHVVLNAL KHQEVRNKLV
AYSNPKYEVF NKTGELLHEQ HDIARFKANA DVIDCCVLTN YQSQKDYENI LNMMQKIGKI
LTH
|
|---|
| |