Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_1825 |
Symbol | |
ID | 4438974 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | + |
Start bp | 1811210 |
End bp | 1811698 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 639673642 |
Product | CBS domain-containing protein |
Protein accession | YP_819519 |
Protein GI | 116630366 |
COG category | [K] Transcription |
COG ID | [COG3620] Predicted transcriptional regulator with C-terminal CBS domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 0.00897459 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTTCTCAC CATCTATTCA ATCTTTGATT GAAGAAAAAG CAGGTTCATT TATCATCCCT GCCTCTAGAA TTGCATTCGT AGAAGATGAA AATCCACTCT ACCATGCTTT TTTAATTCTT ACTAAAATGA AATACTCAAA AATTCCAGTT TTAGATAAGA ATCAAAAAGT AGTGGGTTTA ATCAGTTTGG CAATGATTAC AGATAAGATG CTAACGCCTG ATAATATCGT TATCGAACCT TTATCAGACT TAAAAGTCAA AGATGTAATG CAAACAGATT TTGAAACGAT CAACTTTGCG CATACTAATC TTGAGACGCA GCTACATCTT TTAGTTGACA ATCCTTTTGT TCCAGTTGTA AATGACAACA ATATTTTTCA AGGATTACTT ACAAGAAGAG AATGGATTAA GGCGTTTAAT TACGTAACTC ATTCAATTGA TGATAAATAT GACATTACTA AGAAGAGCAA GCCAAGCGAA ACAAACTAA
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Protein sequence | MFSPSIQSLI EEKAGSFIIP ASRIAFVEDE NPLYHAFLIL TKMKYSKIPV LDKNQKVVGL ISLAMITDKM LTPDNIVIEP LSDLKVKDVM QTDFETINFA HTNLETQLHL LVDNPFVPVV NDNNIFQGLL TRREWIKAFN YVTHSIDDKY DITKKSKPSE TN
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