Gene LGAS_1825 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_1825 
Symbol 
ID4438974 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp1811210 
End bp1811698 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content32% 
IMG OID639673642 
ProductCBS domain-containing protein 
Protein accessionYP_819519 
Protein GI116630366 
COG category[K] Transcription 
COG ID[COG3620] Predicted transcriptional regulator with C-terminal CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value0.00897459 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTCTCAC CATCTATTCA ATCTTTGATT GAAGAAAAAG CAGGTTCATT TATCATCCCT 
GCCTCTAGAA TTGCATTCGT AGAAGATGAA AATCCACTCT ACCATGCTTT TTTAATTCTT
ACTAAAATGA AATACTCAAA AATTCCAGTT TTAGATAAGA ATCAAAAAGT AGTGGGTTTA
ATCAGTTTGG CAATGATTAC AGATAAGATG CTAACGCCTG ATAATATCGT TATCGAACCT
TTATCAGACT TAAAAGTCAA AGATGTAATG CAAACAGATT TTGAAACGAT CAACTTTGCG
CATACTAATC TTGAGACGCA GCTACATCTT TTAGTTGACA ATCCTTTTGT TCCAGTTGTA
AATGACAACA ATATTTTTCA AGGATTACTT ACAAGAAGAG AATGGATTAA GGCGTTTAAT
TACGTAACTC ATTCAATTGA TGATAAATAT GACATTACTA AGAAGAGCAA GCCAAGCGAA
ACAAACTAA
 
Protein sequence
MFSPSIQSLI EEKAGSFIIP ASRIAFVEDE NPLYHAFLIL TKMKYSKIPV LDKNQKVVGL 
ISLAMITDKM LTPDNIVIEP LSDLKVKDVM QTDFETINFA HTNLETQLHL LVDNPFVPVV
NDNNIFQGLL TRREWIKAFN YVTHSIDDKY DITKKSKPSE TN