Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_1808 |
Symbol | |
ID | 4438984 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | - |
Start bp | 1794199 |
End bp | 1795596 |
Gene Length | 1398 bp |
Protein Length | 465 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 639673625 |
Product | amino acid transporter |
Protein accession | YP_815625 |
Protein GI | 116630349 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0531] Amino acid transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000000076298 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.0000000000409798 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAAATT TCTTTAAGAA AGTTCCAGTA AATACTTTTT TAAAAGCGGA TTCTCGATTA ACTAGACATT TAAATGCACG CGATCTAGTT GCACTGGGAA TTGGAGCAGT TATTGGAACA GGTATTTTTA TTTTACCTGG TCATGAAGCA GCTCAGCATG CTGGACCTGC TGTTGCAATC TCGTTTTTAT TAGCGGCAAT TGTTTCTGGT ATGGTTGGAA TGGCATATGC AGAGTTTTCT TCTGCCATGC CAGTAGCTGG ATCTGCTTAT TCTTTTGGCT CAGTGATTTA CGGAGAAATT GTTGGCTGGA TAATCGGATG GGGACTTCTA CTAGAATATT TCTTGGCTGT CTCTGCCGAA GCAACAGGTT TTGCTTCTTA TTTTAATAAT AATATTTTAG CGCCAATTGG TATTCACTTG CCTAAGGCTC TTGAAGCGGG ACCAATGGAA GGCGGAGTAA TTAATCTTTC TGCAGTTTTG ATTGTTTTAA TTGTAGCTCT AATTTTATAT CAAGGCGCTA ATTTATCGAA GCGTGTAGAA AACATAGCAG TAATTATCAA GGTTGCGATT ATCATTTTGT TTATTGCGAT TGGACTGTTT TATATTAAGG CAGAAAATTA TGTTCCTTTT TATCCGAAGA AATTTCAAAC TCCTCCATTA GGAATGGGGG GAATTTCTAC AGCAGCAGCG ACAGTGTTCT TTGCCTTTAT TGGCTTTGAC GCTTTAGCAG CTAATAGTGC TGAAACTAAA GATCCTGCTA AAAATGTAGT TAAAGGAATT ATGGGAACGG TAATTATTGC AGTATTACTT TATGTGAGTT TCTCTTTAGT TCTGACAGGG ATGGTCAACT ATAGGCAATT AAATGTTGAC GATCCAGCAG CATATGCACT GAAAGTTGTT GGATTAACTG CCTGGAATAA GTTGATTACA GTTGGAGCAT TAGTGGGGAT TTTTACAGCA ATGATTACAA TGCTGCTGGG TGGATCAAGA CTGCTCTATG CTTTGGGAAG AGATGGATTG CTGCCTGACT CCATGGGAAG CGTGCATGCT AAAAAGATGA TTCCTGATCA TGCTGTAATT GTTTCTACAG TAGTAGCAGC TATTTTTGCT GGATTAGTCC CATTGATGGA ATTAGCGTCC TTAATAAATG CTGGTACTTT AATTGCTTTT GCTTTAATAT CTTTTGGGAT TATTCCGCTT CGTCATAGAA AAGATATTGT AAATAATGGA TTCAAAATGC CACTTTATCC AGTTTTACCA GTCATATCTG GACTGTTGAG CGTATATTTC ATCTGGATGC TACCAAAGAT GACAAAAATT ATGGTAGGAA TTTGGCTAAT AGCTGGAATA GTTGTATATG TAACGTATGG TGTAAAACAT TCTAAGTTAC AAAAATAG
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Protein sequence | MKNFFKKVPV NTFLKADSRL TRHLNARDLV ALGIGAVIGT GIFILPGHEA AQHAGPAVAI SFLLAAIVSG MVGMAYAEFS SAMPVAGSAY SFGSVIYGEI VGWIIGWGLL LEYFLAVSAE ATGFASYFNN NILAPIGIHL PKALEAGPME GGVINLSAVL IVLIVALILY QGANLSKRVE NIAVIIKVAI IILFIAIGLF YIKAENYVPF YPKKFQTPPL GMGGISTAAA TVFFAFIGFD ALAANSAETK DPAKNVVKGI MGTVIIAVLL YVSFSLVLTG MVNYRQLNVD DPAAYALKVV GLTAWNKLIT VGALVGIFTA MITMLLGGSR LLYALGRDGL LPDSMGSVHA KKMIPDHAVI VSTVVAAIFA GLVPLMELAS LINAGTLIAF ALISFGIIPL RHRKDIVNNG FKMPLYPVLP VISGLLSVYF IWMLPKMTKI MVGIWLIAGI VVYVTYGVKH SKLQK
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