Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_1763 |
Symbol | |
ID | 4439028 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | - |
Start bp | 1748059 |
End bp | 1748661 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 639673581 |
Product | integral membrane protein |
Protein accession | YP_815565 |
Protein GI | 116630317 |
COG category | [S] Function unknown |
COG ID | [COG5523] Predicted integral membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.00234926 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 0.0438415 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAGAT CAGAATTAAA AGCAAATGCG AGAGAGCAAT TACGTGGTAA TTGGCTCTGG GCGGTCGGTT TATGTTTAGT TGGTGCAATT ATGGCTAGTT TGACTAGTTC TTTTAGTATT GGAATCTTAG GCGGAATGGT TTTATATGGT GTTACTTATA CATTTTTAGC CTTGGCAGAT GGTAAAAAAA TTGAAAATAT TTTTAGTGCT ATGTTCTCTG GATTTACTAG TCGTAAGTTT TTGCCAACGT TATTAACATC TTTGCTCGTT GATATTTTTA TTTCCTTGTG GACAATTCTT CTAATTATCC CAGGAATTGT TAAGGGATAT TCTTATTCCA TGGCACCTTA CATTGTTAAG GATCTGGCTG AAGCTGGCAA AGATATTGCG CCAACTGAAG CAATTAACAA AAGTCGTAAG TTAATGGATG GTCATAAAGT CGAGTTATTC TTATTAGATT TAAGTTTTAT TGGCTGGGCA ATTTTAGCTA CTATTCCGTT GGGCTTAGGC TGGCTCTGGC TTACACCTTA TTATCAAGCA ACTAAAGCAA ATTACTACCG TCAATTAGCT GGTGATCAGT TCAAAAAGAC TATTGAAGCA TAA
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Protein sequence | MKRSELKANA REQLRGNWLW AVGLCLVGAI MASLTSSFSI GILGGMVLYG VTYTFLALAD GKKIENIFSA MFSGFTSRKF LPTLLTSLLV DIFISLWTIL LIIPGIVKGY SYSMAPYIVK DLAEAGKDIA PTEAINKSRK LMDGHKVELF LLDLSFIGWA ILATIPLGLG WLWLTPYYQA TKANYYRQLA GDQFKKTIEA
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