| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1676 |
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| Symbol | |
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| ID | 4439787 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | - |
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| Start bp | 1656675 |
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| End bp | 1657997 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 639673497 |
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| Product | cellobiose-specific PTS system IIC component |
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| Protein accession | YP_815405 |
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| Protein GI | 116630233 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1455] Phosphotransferase system cellobiose-specific component IIC |
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| TIGRFAM ID | [TIGR00410] PTS system, lactose/cellobiose family IIC component |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.486485 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 0.0322753 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTGAAA CTACTGCTAA AAAAGATTCA CTGATTACTA AATTGGATAA AGTTTTAACG
CCTATTGGAC AAAAACTTGG AAATGAAAAG CATTTACAAG CTATATCAAA TGGTATGCTT
TTCGGATTGC CATTTTTGGT AATTGGTTCA TTCTTCTTAA TTGTTGCTAA TCCACCAATT
GTACTTGATA GATATAATCC ACGAACTGCT AATATTTTTA TGCAATGGCT TGCTGGTTGG
AAATATTGGG CTGTCGCACA TTATGCTCAA ATAACTATCC CATATAATAT GACCATGGGA
ATCTTTGGTA TGATTTGTGC TTTTGGTATT GCATATGAAT TGAGTAAGTC ATATCGTCGG
CTTCATCCTG CTACTGATGG GATGATCTCA TTAGTTACCT TTTTAATGGT TGCAACTACT
GTTGATAAGA ATAATAAGAT TAGTCTTAAT AACTTAGGAA CAAATGGACT ATTTGTTGCA
ATTATCATTG GATTATTAGC TGTTGAAATT GACCGCAGGA TTGAAAAGAG CAAGTTGAAG
ATAAAGTTGC CAGCATCAAT TCCCCCAATG GTTGCCAACT TTATTAATTC CTTAATACCG
TTATTAGCAA ATATCTTTAT TTTCTATGGT GCTAACTTAA TTTTGGTTAG CATAACGCAT
ACTGATTTCA CTACCTTCAT TATGAAGTGT TTGACTCCAG CTACATTTTT AGCTAACAGT
TTATGGGGTT ATATTTTAAT TGTAACTTTA GGGAATTTAT TATGGTTAAT TGGTGTTAAC
GGAAGTAACG TAATCTTCCC AATTGTCTTT GCGACTGGTA TCGCAGCTAC TGGTGCTAAT
GCTGCTTTAG TAGCAAAGGG ATTAGCACCT ACTCATTTAA TGAATTTACA GATGTTTAGA
ATTGCCGTCT TAGGTGGATC TGGTAATTCA CTTGCTTTAG TAATTTTAAT GATGAGAAGT
AAGGTAGAAA AATATCGTGC ATTAGGCAAA TTATCAATTA TTCCTGGAAT CTGTAGTATT
AATGAACCAG TAATTTTTGG TACACCAATT TGTTTTAATC CTATTTTAGG TATTCCATTT
TTGATTGCTC CAATTATTAA TATTATTCTT ACTTATATTG CTGAGAGTTT ACACTGGATT
GGAATGGGCT ATATTGTAGA TCCTTCATTT ACACCGTTCT TCTTCCAGGC ATATATGAGT
TCAATGGATT GGAGAAATAT TATTTTTGAA GTGATTTTAA TCATTATTGG TATTTTTATC
TATTTGCCAT TCTTTAGAGT TGCTGAACAA AATGAATTAA GAAAACAAGA AGTAACTGAA
TAA
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| Protein sequence | MAETTAKKDS LITKLDKVLT PIGQKLGNEK HLQAISNGML FGLPFLVIGS FFLIVANPPI
VLDRYNPRTA NIFMQWLAGW KYWAVAHYAQ ITIPYNMTMG IFGMICAFGI AYELSKSYRR
LHPATDGMIS LVTFLMVATT VDKNNKISLN NLGTNGLFVA IIIGLLAVEI DRRIEKSKLK
IKLPASIPPM VANFINSLIP LLANIFIFYG ANLILVSITH TDFTTFIMKC LTPATFLANS
LWGYILIVTL GNLLWLIGVN GSNVIFPIVF ATGIAATGAN AALVAKGLAP THLMNLQMFR
IAVLGGSGNS LALVILMMRS KVEKYRALGK LSIIPGICSI NEPVIFGTPI CFNPILGIPF
LIAPIINIIL TYIAESLHWI GMGYIVDPSF TPFFFQAYMS SMDWRNIIFE VILIIIGIFI
YLPFFRVAEQ NELRKQEVTE
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