| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1642 |
|---|
| Symbol | |
|---|
| ID | 4439152 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus gasseri ATCC 33323 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008530 |
|---|
| Strand | - |
|---|
| Start bp | 1603698 |
|---|
| End bp | 1604783 |
|---|
| Gene Length | 1086 bp |
|---|
| Protein Length | 361 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 639673467 |
|---|
| Product | ABC-type sugar transport system, ATPase component |
|---|
| Protein accession | YP_815375 |
|---|
| Protein GI | 116630203 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00000000174606 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 73 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGAAG ATAAATTCAT TCAGGTAAAT AACCTAGAAA AAACTTATGA GAATGGTTAC
CAAGCAATTA AATCTGTTAG CTTTTCTGTA AAGAAGGGTG ACTTGGTATG TTTGTTGGGT
CCTAGTGGTT GTGGGAAAAC CACTACCTTA AATATGATCG CAGGCTTATT AAATCCAACT
GGAGGAGACA TCATTGTAAA TGGTAAGTCT CTTCTTAATG TTGCGCCTAA AGATCGTAAC
ATTGGATATG TTTTCCAAAA CTATGCCTTG TACCCTCATA TGACAGTCTT ACAAAATGTA
ATGTTTCCAA TGACAGTTGG AAAGAACAAG AAGCCTAAGG ACGAGGCAGA AAGAATTGCC
AAAAAGTTTA TGAAGTTAAC TCATATTGAA GAGTTAGCTG ATCAAAAACC AGGTAACCTT
TCTGGTGGTC AACAGCAGCG TGTTTCAATT GCACGTGCTT TAGTGCAAGA GCCACAAATT
TTGTTAATGG ATGAACCACT AAGTAACTTA GATGCACGTC TGCGTTTAAA GATTCGTGAA
GAGATTCGTA ATTTGGTTAA AGAAGTGGGC ATTACCACTT TATTTGTTAC GCACGATCAA
GAAGAAGCTT TATCAATTGG AGATAAGATT ATTCTTTTCC ATAACGGTGT AATTCAACAA
GATGATAAGG GACAAGATCT TTATTTAGAA CCAAATAATC AATTTGTAGC TAACTTTATT
GGTAATCCAG TTATTGATAA TTTTGATGTT AAAGTAGCAA ATGATCAGAT TGTTGGTTCA
GATTTTGAAA TTCCAGTTGC AAAATTAAAT AGTTCAAAAT TTAGAAGTGA ATTAGCAGAT
GGTGATTATA CATTAAGTAT TCGTCCAGAA AACTTGAAGC TAGCTGATGA AGGCGAACTT
TCTGAAGTAA TTGATGATAT AGAGTTAATT GGACGCGAGC GTGTATTGAA GTTTAATCAT
GCTGGAATTA GTCAACGTGC ATTAATTGAT TTAGAGCAAG AAGTAAAACG CGGAGATAAA
GTTAAATTTA AGATGAATTT AGATCGTATT TACTTATTTA AGCCAGATGG GGAGCGAATC
TATTAA
|
|---|
| Protein sequence | MNEDKFIQVN NLEKTYENGY QAIKSVSFSV KKGDLVCLLG PSGCGKTTTL NMIAGLLNPT
GGDIIVNGKS LLNVAPKDRN IGYVFQNYAL YPHMTVLQNV MFPMTVGKNK KPKDEAERIA
KKFMKLTHIE ELADQKPGNL SGGQQQRVSI ARALVQEPQI LLMDEPLSNL DARLRLKIRE
EIRNLVKEVG ITTLFVTHDQ EEALSIGDKI ILFHNGVIQQ DDKGQDLYLE PNNQFVANFI
GNPVIDNFDV KVANDQIVGS DFEIPVAKLN SSKFRSELAD GDYTLSIRPE NLKLADEGEL
SEVIDDIELI GRERVLKFNH AGISQRALID LEQEVKRGDK VKFKMNLDRI YLFKPDGERI
Y
|
|---|
| |