Gene LGAS_1499 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_1499 
Symbol 
ID4439289 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp1490724 
End bp1491281 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content37% 
IMG OID639673327 
Producthypothetical protein 
Protein accessionYP_815293 
Protein GI116630121 
COG category[S] Function unknown 
COG ID[COG4720] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.494823 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones93 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAAGC AAAAAGGTTT ATCAGTAAAA AGCGTTGTTG CAATTGGTAT TGGAGCAGCA 
ATCTATGTTA TTTTGGCACG TTTCACATCA ATTCCAACTG GCATTCCAAA CACTAATATT
GAAATTGTCT ACCCATTCTT AGCTTTACTT GCCACTATTT ATGGTCCTGT TGTTGGATTT
TCTGTTGGTT TCATCGGCCA TGCACTAGGT GACTTCTTAA TGTATGGTCA AACTTGGTGG
AGCTGGGTTT TGGCTACAGC TGTTTTAGGT TTAATCATCG GTCTTTATGG TATGCGCCTT
GACTTAGATA ATGGCGTCTT CACTGTTAAA CAAATGGTTG GCTTTAACGT TGTCCAAATC
ATTGCTAACG TTATTTCTTG GTTATTAATT GCACCAGTTG GCGATATCTT AATCTACAGC
GAACCTCAAA ACAAGGTCTT CTTACAAGGA GCTACTGCAA CCATTACTAA CTCACTTTCT
ATTCTTATTT TAGGAACCAT CTTGCTTAAA GCTTATGCAG CAACTAAAGT TAAGAAAGGT
AGTTTACGTA AAGACTAA
 
Protein sequence
MNKQKGLSVK SVVAIGIGAA IYVILARFTS IPTGIPNTNI EIVYPFLALL ATIYGPVVGF 
SVGFIGHALG DFLMYGQTWW SWVLATAVLG LIIGLYGMRL DLDNGVFTVK QMVGFNVVQI
IANVISWLLI APVGDILIYS EPQNKVFLQG ATATITNSLS ILILGTILLK AYAATKVKKG
SLRKD