Gene LGAS_1457 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_1457 
Symbol 
ID4440609 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp1444660 
End bp1445184 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content35% 
IMG OID639673287 
ProductNUDIX family hydrolase 
Protein accessionYP_815253 
Protein GI116630081 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0054523 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones125 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGAAC TAAACCTCGA ATTACAAGAC ACACAATGGC CGAAAACCTA TATCGATCAT 
GATCGACAAA TTGTTCGTGC GATTGTAGTT GACGATCAAC AAAAGTATTA CTTTGTAAGA
GTACAGAGAG ATGATGATTT CGGTAAGGGT ATCTTCATTG AAACATCTGG TGGCGGAGTT
GAAGCAGGCG AAGACCTAAC TACAGCACTT AAAAGAGAGC TAAAAGAAGA ATTGGGCGTA
AATGTCGATA TTCTTTGTAA GATTGGCACA GTAAGCGACT ATTATAGCTT AATTCATCGG
CACAACATTA ATAATTACTT TTTATGTAAA ATAGTTTCTT TTGGTGAAAA ACATCTAACG
CAAGCAGAAA TTGAAGATTT TCATTTATCA ACGTTAAAGT TAACTTATGA AGAAGCGGTT
GATGCGTATA AAAAACAAAC TAGTACTAAG TTGGGACAGC TGATTACCAA CCGAGAATTA
CCGATTCTCA AACAAGCAGA AGAACTAATA AGCAATTATA TGTAA
 
Protein sequence
MPELNLELQD TQWPKTYIDH DRQIVRAIVV DDQQKYYFVR VQRDDDFGKG IFIETSGGGV 
EAGEDLTTAL KRELKEELGV NVDILCKIGT VSDYYSLIHR HNINNYFLCK IVSFGEKHLT
QAEIEDFHLS TLKLTYEEAV DAYKKQTSTK LGQLITNREL PILKQAEELI SNYM