Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_1457 |
Symbol | |
ID | 4440609 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | - |
Start bp | 1444660 |
End bp | 1445184 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 639673287 |
Product | NUDIX family hydrolase |
Protein accession | YP_815253 |
Protein GI | 116630081 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1051] ADP-ribose pyrophosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.0054523 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 125 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAGAAC TAAACCTCGA ATTACAAGAC ACACAATGGC CGAAAACCTA TATCGATCAT GATCGACAAA TTGTTCGTGC GATTGTAGTT GACGATCAAC AAAAGTATTA CTTTGTAAGA GTACAGAGAG ATGATGATTT CGGTAAGGGT ATCTTCATTG AAACATCTGG TGGCGGAGTT GAAGCAGGCG AAGACCTAAC TACAGCACTT AAAAGAGAGC TAAAAGAAGA ATTGGGCGTA AATGTCGATA TTCTTTGTAA GATTGGCACA GTAAGCGACT ATTATAGCTT AATTCATCGG CACAACATTA ATAATTACTT TTTATGTAAA ATAGTTTCTT TTGGTGAAAA ACATCTAACG CAAGCAGAAA TTGAAGATTT TCATTTATCA ACGTTAAAGT TAACTTATGA AGAAGCGGTT GATGCGTATA AAAAACAAAC TAGTACTAAG TTGGGACAGC TGATTACCAA CCGAGAATTA CCGATTCTCA AACAAGCAGA AGAACTAATA AGCAATTATA TGTAA
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Protein sequence | MPELNLELQD TQWPKTYIDH DRQIVRAIVV DDQQKYYFVR VQRDDDFGKG IFIETSGGGV EAGEDLTTAL KRELKEELGV NVDILCKIGT VSDYYSLIHR HNINNYFLCK IVSFGEKHLT QAEIEDFHLS TLKLTYEEAV DAYKKQTSTK LGQLITNREL PILKQAEELI SNYM
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