| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1455 |
|---|
| Symbol | |
|---|
| ID | 4440607 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus gasseri ATCC 33323 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008530 |
|---|
| Strand | + |
|---|
| Start bp | 1442939 |
|---|
| End bp | 1444258 |
|---|
| Gene Length | 1320 bp |
|---|
| Protein Length | 439 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 639673285 |
|---|
| Product | nucleotidyltransferase/DNA polymerase for DNA repair |
|---|
| Protein accession | YP_815251 |
|---|
| Protein GI | 116630079 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 49 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 123 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTATGACT ATCGCTACGA ACCGCATCGC TTAATTTTTA TGATTGATAA TAAGAGTTTT
TTTGCCTCCT GTGAGGCGCT TCGTTTAGGT CTTAATCCGA TGGAAACCTG TTTAGCCGTT
GTGTCTAGAC AACCTGACAG TTGCTGGGGA TCCGGCTTAA TTATGGCAGC CTCTCCTTTA
GCTAAGAAAA AATATGGCTT GCATAATGTT ATGCGCGTCC GCCAATTACC GCCTAAATGG
AAAGCCCCTG ATTTAAAGCT AGTTGAACCC CACATGAATC TTTATATTAA GCGCAGCGTT
CAAGTCTTAG ATATTTTCAG AAAATATGCG GCTAACGAAG ATATTCACAT GTATTCCATC
GATGAAGGAA TGATCGACAT GACTGATTCT TGGAAACTCT TTGGCAATGG TCCCTATTAT
GTTGCACGCA AAATTCAAAA AGATATTCAT GATGCTTTGG GACTTTATAC TACTTGCGGA
ATCGGTGAAA ATCCTCTTTT GGCTAAACTA GCAATGGATA ATTCTGCTAA ACACAAAAAA
TCGATGCTTG CTTTTTGGCA TTATCTTGAC GTCCCCGATA CTATTTGGAA AATAGAAAAA
TTAGAAGATG TTTGGGGAAT AAATACTCGC ACTGCTAATC GGTTAAGAAA AATCGGAATT
AACAATATGT ATGACTTAGC TCACTCTAGT CCTTATCTTC TAAAAAAAGA ATTTGGAATT
ATTGGTGAAC AATTATTGGC AGAAAGTTGG GGCGTCGACC GTAGTATCAT CAGACAAAAA
TATCATCCCA AAAGTAAAAG CTATGGTAAC TCTCAAGTTT TAACGCGGGA TTATTTCAAT
CAACGTGAAA TAGAACTGGT CATTAGAGAA ATTGGTGAGC AAGTCGCGGC CCGTATTCGC
GCCCATAATT TACGAGCGGG CAAAGTTAGT CTGTATATTG GCTTTTCCCT TTTTCAATTG
ACGGAAACTA CTAAACGCGG TGGTTTTGGC GTTCAACGTA AAATTACTCC AACTAATGTA
AACCATGACT TAGTAAAAGA ACTGATTGCT TTATTTCGCG AAAACTGGCA TAGAGAAAGC
GTTCGTACGA TTAGTGTCAG CTACACCGAC TTATCACCTG ATGGTACACA ACAATTAAAT
ATGCTTGAAG ACTTTGATCT GCAAATTAAA AGATATAAAT TAGACCACAT TGTTGACAAA
ATACGAAAAG AGCATGGTTT CACTTCGCTA GTCAAAGCTT CTAGCCTACT CAAAGGTGCG
ACTGCTATTG AACGCAGTAA TTTAGTTGGT GGACATAACG GAGGTAACGC TTATGAATAA
|
|---|
| Protein sequence | MYDYRYEPHR LIFMIDNKSF FASCEALRLG LNPMETCLAV VSRQPDSCWG SGLIMAASPL
AKKKYGLHNV MRVRQLPPKW KAPDLKLVEP HMNLYIKRSV QVLDIFRKYA ANEDIHMYSI
DEGMIDMTDS WKLFGNGPYY VARKIQKDIH DALGLYTTCG IGENPLLAKL AMDNSAKHKK
SMLAFWHYLD VPDTIWKIEK LEDVWGINTR TANRLRKIGI NNMYDLAHSS PYLLKKEFGI
IGEQLLAESW GVDRSIIRQK YHPKSKSYGN SQVLTRDYFN QREIELVIRE IGEQVAARIR
AHNLRAGKVS LYIGFSLFQL TETTKRGGFG VQRKITPTNV NHDLVKELIA LFRENWHRES
VRTISVSYTD LSPDGTQQLN MLEDFDLQIK RYKLDHIVDK IRKEHGFTSL VKASSLLKGA
TAIERSNLVG GHNGGNAYE
|
|---|
| |