| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1442 |
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| Symbol | |
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| ID | 4439353 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | - |
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| Start bp | 1430181 |
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| End bp | 1431392 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 639673272 |
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| Product | ABC transporter permease |
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| Protein accession | YP_815239 |
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| Protein GI | 116630067 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4473] Predicted ABC-type exoprotein transport system, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000000890644 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 76 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGATT TAATAAAAAA TAGACTCAAT AAAAACTTTA AAAAGCAGAT GCACTATCTA
ACTTTGGTTT TTAATGACTT TTTTATTTTG GCTTTAATTT TCCTATTTGG AGCTTTAATG
TTTTGGTATG CACAAAATAT TAAGAAGTGG CCAAATAATC TTTGGTTTTA TAAACCATTG
TTAGCTTTGA TTTGGACTAC AACTTTAGGA ATTGGGCATT TTGCGACTTT GTTTGATAGA
GCTGATGAGC ATTTCCTTTT TAATCAAGAT AGTGAAATGA AGAAGTATTT CAAGCCAATA
TATATGCATA ATATGATTTT GCCAACGGTC TTGATTATTT TAGTATCGGG TATTTTATTG
CCGTTTGCGA CAATGAGAGC TAATTTTTCA ATCGGCGACC TAGTCTTTAT AGTAATTGGG
TTAATTGCAA GTAAAAATTT ACAGTTTAAG TTGATTGTCA GAAGTTTTTA TTTTAATAAG
CATGATTACT ATAATATTTG GTTATTTTTA GGAATTAACT TTTTAATACT CTATCTATCT
TTTTTGGAGT ATTATCCAAA TCCAATTATC TATGCTAATG TAGCAATTGC TGGCTGGGTT
GGAGTAGATT ATTTGCCACG TGGTAAAATG TTTGACTGGT ACAAAGCCTT AGACTATGAA
GAAAGAAGAG TTGATCTCTT AAATAACTTT TATAGTATGT TTACCGATGT ACCAGATAAG
AAAGTTCGAA TTGCTAGAAG AAAGTATTTA GACTTTTTAA TTAAAAATGT CGATCAAACG
CCAAATACTT TTATTTATCA AAGAGTATTA TTAAGAGATC CAGAATATAG CAATTTATTG
ATTAGAATGG TGCTTTTTTC AATTTTATTA ATTGCTTGCT TGCAAGATGC ACGCTGGGCA
ATTGCTAGTG GTGCTTTGAT TATTTTCTTA ACGCTTTATC AATTGATCCC TCTAGGAACA
GTTTATGAGC ATAATATGAT GTATCATGTA ATGCCAATCC CGCTAACCTC AAGAGGAGAA
GCACTAAGAA AAGTTTTGCA AAAAGGGATG CTGCTTGAAT GGGGATTAAT CAGTTTGGCG
ATAATTATTT TTTCTCCACA AAAATTAGAA GCAGTTGGTG GCGTTATTGG TTTGCTTGCT
TTAACATTTT TATTGCTATA TTTCTATTTA CCAAGTAAAA TTGAACAGTT ATTTAAAAAA
GTTAGATATT AG
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| Protein sequence | MTDLIKNRLN KNFKKQMHYL TLVFNDFFIL ALIFLFGALM FWYAQNIKKW PNNLWFYKPL
LALIWTTTLG IGHFATLFDR ADEHFLFNQD SEMKKYFKPI YMHNMILPTV LIILVSGILL
PFATMRANFS IGDLVFIVIG LIASKNLQFK LIVRSFYFNK HDYYNIWLFL GINFLILYLS
FLEYYPNPII YANVAIAGWV GVDYLPRGKM FDWYKALDYE ERRVDLLNNF YSMFTDVPDK
KVRIARRKYL DFLIKNVDQT PNTFIYQRVL LRDPEYSNLL IRMVLFSILL IACLQDARWA
IASGALIIFL TLYQLIPLGT VYEHNMMYHV MPIPLTSRGE ALRKVLQKGM LLEWGLISLA
IIIFSPQKLE AVGGVIGLLA LTFLLLYFYL PSKIEQLFKK VRY
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