Gene LGAS_1424 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_1424 
Symbol 
ID4439370 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp1418196 
End bp1418672 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content32% 
IMG OID639673256 
Producttranscriptional regulator 
Protein accessionYP_815223 
Protein GI116630051 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0154765 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.000999749 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGCTTTATA ATATATTAGT TAGACAGCTA ACAAAAATAG AAGGGGGAGA TAAAATGGAG 
ACACTGAAAA AGTTGATTAA ACAAGCAGCT ACTCAAATTG ATCGTGAACG TGAAATTTTT
GCTAATAGTT TAGGCGTGAC AGGCGTGCAA ATGTCAGTGA TCGATTTTTT ATCTAATCAT
GAAAACAGTC TTGCTTCGCA AAATGAAATC GAGCATGAAT TTAATATTAA GCGATCAACA
ACTACAATCA TGCTGCAACG GATGGAGAAA CATGGATTAA TTATTAGAGT TAATGATCCT
AAAGACAAAA GAAAAAAGCA GGCACAATTA ACTGAATCTG CCTTAAGGAT AGTGCCTAAA
ATTAGGCAGT ATATGAAACA AGATAATGAA GAAGTTTTAG GTAATTTATC AATGAAAGAT
GTAAATATTA TTACGGCTTT TCTAAAGAAT ATTAAGGAAG GAAAAGCAAA TGACTAA
 
Protein sequence
MLYNILVRQL TKIEGGDKME TLKKLIKQAA TQIDREREIF ANSLGVTGVQ MSVIDFLSNH 
ENSLASQNEI EHEFNIKRST TTIMLQRMEK HGLIIRVNDP KDKRKKQAQL TESALRIVPK
IRQYMKQDNE EVLGNLSMKD VNIITAFLKN IKEGKAND