Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_1424 |
Symbol | |
ID | 4439370 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | - |
Start bp | 1418196 |
End bp | 1418672 |
Gene Length | 477 bp |
Protein Length | 158 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 639673256 |
Product | transcriptional regulator |
Protein accession | YP_815223 |
Protein GI | 116630051 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.0154765 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 0.000999749 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGCTTTATA ATATATTAGT TAGACAGCTA ACAAAAATAG AAGGGGGAGA TAAAATGGAG ACACTGAAAA AGTTGATTAA ACAAGCAGCT ACTCAAATTG ATCGTGAACG TGAAATTTTT GCTAATAGTT TAGGCGTGAC AGGCGTGCAA ATGTCAGTGA TCGATTTTTT ATCTAATCAT GAAAACAGTC TTGCTTCGCA AAATGAAATC GAGCATGAAT TTAATATTAA GCGATCAACA ACTACAATCA TGCTGCAACG GATGGAGAAA CATGGATTAA TTATTAGAGT TAATGATCCT AAAGACAAAA GAAAAAAGCA GGCACAATTA ACTGAATCTG CCTTAAGGAT AGTGCCTAAA ATTAGGCAGT ATATGAAACA AGATAATGAA GAAGTTTTAG GTAATTTATC AATGAAAGAT GTAAATATTA TTACGGCTTT TCTAAAGAAT ATTAAGGAAG GAAAAGCAAA TGACTAA
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Protein sequence | MLYNILVRQL TKIEGGDKME TLKKLIKQAA TQIDREREIF ANSLGVTGVQ MSVIDFLSNH ENSLASQNEI EHEFNIKRST TTIMLQRMEK HGLIIRVNDP KDKRKKQAQL TESALRIVPK IRQYMKQDNE EVLGNLSMKD VNIITAFLKN IKEGKAND
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