| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1421 |
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| Symbol | |
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| ID | 4439367 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | - |
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| Start bp | 1412802 |
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| End bp | 1415492 |
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| Gene Length | 2691 bp |
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| Protein Length | 896 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 639673253 |
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| Product | DNA polymerase I |
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| Protein accession | YP_815220 |
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| Protein GI | 116630048 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0258] 5'-3' exonuclease (including N-terminal domain of PolI)
[COG0749] DNA polymerase I - 3'-5' exonuclease and polymerase domains |
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| TIGRFAM ID | [TIGR00593] DNA polymerase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0115482 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.000000064495 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGACAGTTT TTTTATTTAA GGAGAAAAAG ATGGCACAAA AGAAATTACT TTTAATTGAC
GGTAACTCTG TGGCCTTTCG TGCCTTTTAT GCTTTATACC GTCAGCTTGA TCGCTTTACT
AGTCCAGATG GGTTACATAC AAATGCAATT TTTACTTTTA AGAATATGCT TGATGCGATT
ATGAAGCAGA CTGATCCAAG CAATGTATTA GTTGCGTTTG ATGCAGGAAA AGTAACTTTT
AGAACTAAGA TGTATCAGGA TTATAAAGGC GGTCGACAAA AAACTCCAAG TGAATTATCA
GAACAATTGC CTGTAATTCG TGAAATGCTT AAAGATTTAG GAATAAAGAG CTATGAGCTA
AAAAATTATG AAGCAGACGA TATTATTGGC ACACTTTCTA AAATGGGGGA AGAAGCAGGC
TACACTGTTG ATATTGTAAC TGGGGATCGT GATTTAACTC AGCTTGCTTC TGATAAAACC
ACGGTTTTAA TAACTAAAAA TGGAGTTGGT GATACTGAAG CATATACGCC AGAACATATG
AAAGAAGTTA ATGGCGTAAC GCCAACTGAA TTTATTGATA TGAAAGCGCT GATGGGAGAC
AATTCAGATA ACTATCCAGG TGTAACTAAA GTTGGTCCGA AAACAGCTTC ACGTTTAATT
CAAAAATATG GCTCTGTTGA AAAACTTTAT GAACATGTGG ATGAAATGAA AAAATCCAAG
TTAAAAGAGA ACCTAATTAA TGATAAAGAT AAGGCAATTT TAGCTAAAAA GTTAGCAACA
ATTGATCGTG ATTCTCCAGT AGAAGTGACA CTTGCTGATA CTAAGCTAGA AGAGCCTAAT
ATTGAGGACT TACGTAATTT ATATGAAAGA TTAGGATTTA AAAAATTCTT AGCTGAGTTA
GGTGCAAGTG GAGTGAGTGC CGGTAAGCAA GAAAGTGAGA AGTACGAGTA TCTAGAATTA
ACAAGAGAAA ATATCGCTGA CTTAGATAAA ATTAATGAAA AAGAAGTGAC ATTTTATCTG
GCAATGTTGG GTGATAACTA CCATCTAGCT CCGCTTGAAG GATTTTCACT AAAGGTTAGT
GATAAAATCT ATGTTTCTAA AGATGTAGTC TTACTGCAAG AAGCTCCACT TCGTCAAATG
CTAGAAGATA AGAAGATTAA GAAAAATGTT TTCGACATTA AAAGAACCTA TGTAGGTTTA
CATCGACTAG ATATTGATGC AGAAGGTCTA GATTATGACA TGCTCCTGGC TTCTTATTTA
GTTAATAATG AAAATAATTC GAATGATCTT GGCGAAGTAG CGCATTTGTA TGATGATTAT
TCAGTAAAAA CTGACTTGGA AGTTTATGGT AAAGGTAAAA AGCAAGCTGT ACCTGAAGAT
GATGAGTTCT TTGAACATTT AGCAGCTAAA GTTGCTGTAA TTGAGAAGTT AAAGCAGCCA
CTTTTAGAGA AATTAAAAGA TCACGAGCAA GATGACTTGT ATGAAACAAT TGAAATTCCA
GTTGCTTTTG TCTTAGCTAA AATGGAAATT ACTGGGATTA AGGTTGAAGC ATCGGTTTTA
AATCAATTAG GCAATGATTT TGCAGTTAAA TTACAAGAAT TAGAACATAA GATTTATCAA
CAAGCCGGCG AAGAATTTAA TTTAAATTCA CCAAAACAGT TAGGACATAT TCTTTTCGAA
AAATTAAACT TACCGCCAAT TAAAAAGACC AAAACTGGCT ATTCAACTTC TGTTGAAGTA
TTAGAGCAAT TGAAGATGAA GAGCCCGATT GTTTCAGAAA TTTTGGATTA TCGTCAAATT
GCTAAAATTC AAAATACTTA TGTTAAAGGA TTACTTGAGT GTATTCAGCC TGATAGCAGA
ATCCATACCC GTTATTTACA AACATTAACT GCAACGGGGC GTCTTTCATC GGTTGATCCT
AATTTACAAA ATATTCCAAC TAGAACTGAT GAGGGAAAAC AGATTAGAAA AGCTTTCGTG
CCTTCAACTA AAGACGGCTA TATCTTTTCT TGTGACTACT CACAAGTTGA ATTAAGAGTT
TTGGCACACG TTTCTGGGGA TGAACATATG CAGGAAGCAT TTAAGTCTGG TTATGATATT
CACGCTCACA CTGCAATGAA GATTTTCCAT TTGGATTCAC CTGATGAAGT AACGCCATTA
ATGCGTCGGC ATGCTAAGGC AGTCAACTTC GGAATAGTTT ACGGTATTTC TGATTATGGT
TTGTCTAAGA ACTTAGGCAT TAGTCGTAAG CAAGCAAAGA CATTTATTGA TAATTACTTT
GAGCAATATC CGCAAATTAA AGATTATATG GATAAGGCAA TTAAGAAAGC TCGAGAAAAC
GGCTATGCAG AAACTATTAT GCATAGAAGA CGCTACTTGC CAGATATTCA TTCAAAGAAC
TTTAATGTTA GAAGCTTTGC GGAAAGAACT GCAATTAATT CTCCTATTCA AGGTTCAGCT
GCTGATATTA TTAAGATTGC TATGATTAAT ATGCAAAAGA AACTTGATGA ATTACATTTA
AAGACTAAAA TGGTTCTACA AGTACACGAT GAACTTATTT TTGATGTACC AAAGGATGAA
TTAGATACAA TTAAAAAGAT TGTGCCAGAA GTTATGCAGT CAGCTGTAAA ACTAGATGTT
CCACTAATTG CTGACTCTAA CTGGGGCCAT AATTGGTATG ATGCTAAGTA A
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| Protein sequence | MTVFLFKEKK MAQKKLLLID GNSVAFRAFY ALYRQLDRFT SPDGLHTNAI FTFKNMLDAI
MKQTDPSNVL VAFDAGKVTF RTKMYQDYKG GRQKTPSELS EQLPVIREML KDLGIKSYEL
KNYEADDIIG TLSKMGEEAG YTVDIVTGDR DLTQLASDKT TVLITKNGVG DTEAYTPEHM
KEVNGVTPTE FIDMKALMGD NSDNYPGVTK VGPKTASRLI QKYGSVEKLY EHVDEMKKSK
LKENLINDKD KAILAKKLAT IDRDSPVEVT LADTKLEEPN IEDLRNLYER LGFKKFLAEL
GASGVSAGKQ ESEKYEYLEL TRENIADLDK INEKEVTFYL AMLGDNYHLA PLEGFSLKVS
DKIYVSKDVV LLQEAPLRQM LEDKKIKKNV FDIKRTYVGL HRLDIDAEGL DYDMLLASYL
VNNENNSNDL GEVAHLYDDY SVKTDLEVYG KGKKQAVPED DEFFEHLAAK VAVIEKLKQP
LLEKLKDHEQ DDLYETIEIP VAFVLAKMEI TGIKVEASVL NQLGNDFAVK LQELEHKIYQ
QAGEEFNLNS PKQLGHILFE KLNLPPIKKT KTGYSTSVEV LEQLKMKSPI VSEILDYRQI
AKIQNTYVKG LLECIQPDSR IHTRYLQTLT ATGRLSSVDP NLQNIPTRTD EGKQIRKAFV
PSTKDGYIFS CDYSQVELRV LAHVSGDEHM QEAFKSGYDI HAHTAMKIFH LDSPDEVTPL
MRRHAKAVNF GIVYGISDYG LSKNLGISRK QAKTFIDNYF EQYPQIKDYM DKAIKKAREN
GYAETIMHRR RYLPDIHSKN FNVRSFAERT AINSPIQGSA ADIIKIAMIN MQKKLDELHL
KTKMVLQVHD ELIFDVPKDE LDTIKKIVPE VMQSAVKLDV PLIADSNWGH NWYDAK
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