Gene LGAS_1393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_1393 
Symbol 
ID4439409 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp1391042 
End bp1391398 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content37% 
IMG OID639673226 
Producttranscriptional regulator 
Protein accessionYP_815193 
Protein GI116630021 
COG category[K] Transcription 
COG ID[COG1733] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0000189359 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value8.40763e-24 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCCCAAG AAATTGAAAG CAAAACTAAA ATGGGTGACT GTCCAGATCC AGAAGATTAC 
TCACTGTGTT CGCATTTTAT TGATGCTTTT GCAATTATTG GTAAAAAATG GAATGGTTTA
ATTATCAGCT CTTTGTGCGA TACTAATGCA ATGCGTTTTA AGGATTTAGC ACGTTGTATT
AGTAAGTGTT CTGATCGAGT TTTAGTGGAA CGTTTGAAAG AACTAGAAAA GGACGGTATT
GTTAATCGTA CAGTTGATGA AAAGAGCGGT ATTATTAGCT ATACTTTGAC CCAGAAAGGC
GCAGACTTAC AGCCTGTTTT TGAACAAGTT CATAATTGGG CTGATAAATG GGCCTGA
 
Protein sequence
MSQEIESKTK MGDCPDPEDY SLCSHFIDAF AIIGKKWNGL IISSLCDTNA MRFKDLARCI 
SKCSDRVLVE RLKELEKDGI VNRTVDEKSG IISYTLTQKG ADLQPVFEQV HNWADKWA