| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1388 |
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| Symbol | |
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| ID | 4439404 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | + |
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| Start bp | 1382945 |
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| End bp | 1385524 |
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| Gene Length | 2580 bp |
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| Protein Length | 859 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 639673221 |
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| Product | hypothetical protein |
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| Protein accession | YP_815188 |
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| Protein GI | 116630016 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4485] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000211838 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 2.84061e-22 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTTATCA CCAAAATTAA AATACATTTT AAAAATAAAT ATCTATATTG GCTTTCTTTT
TTACTACCTG CTTGTATTTT CGCAAGCTAC TTTATATATC GCAATCATGA GATTCTTACC
GTTGATTTAG GTCAGCAATA TATTGATTTT TTAGCTTTTT ATAAAAACAA CTTATTTTCT
AATCCGCTAA ATTTTATTTT TACGTTTAGT AGCGGATTAG GCAATTCTTT TATTGGAACC
TGGGCTTATT ACTTAACTAG TCCCTTTAAC TTTTTATTAT TAATTTTTCC CAAGTCGCAG
TTACCTGAAG CAATACTTTT AATTATTAGT TTAAAAATTG GAAGTATCGG ATTAAGCGGT
TTTTATTATT TTCAAAAGTT TTTTAACGGC GATAATAAGA TCTTTGCTCT TGCAGCTAGC
CTAGCTTTCT CATTAAGCGG ATTTGTTGTT AGTTATAACT TAAACTTAAT GTGGCTTGAC
AGCCTAATTT TGCTACCTCT ATTACTTGAC GCGATTGATA AATTAGAAGA CAAACGCCGA
CACTACTTCT ATCTTACCAT GATCACTTTT CTATTATGGC TTACCAATTT TTATACCGGC
TTCATGGTGC TTTTTTTCGG CTTACTTTAC TTTATTAATA CGCTACTCAA TTCTTCTTTT
TCTAAAAAAC AAATTATCCT TCAATATGTT ACTAAAAGTT TTTTTGGTAC TAGTTTAGCT
GCACTCATAT TACTACCATC ATTCTTTGAA ATATTAAATG GAAAAATTCA TTCAGATACT
ACCTTATCAA TGGGATTTCA ATTTCCTCCA TATCAAACAT TTTACAAATT AACTATTGGC
GCCTTTAATT TTACTGAAAT GGAAAAAGGA TTACCCAATA TCTTTTTAAC TAGTATCTTT
ACTCTTCTGT GTATTCTCTA CTTCATTAAT CAACATTTTT CTATTAAAGA AAAGCTATTA
TCTGCGCTAT TACTAACATT CTTATTTTTT TCCTTTAGTT TTAACCCTCT TATCTTACTT
TGGCATTTAG GACAATACCC AGTTTGGTAT CCAGCTCGCT TTAGCTTTAT CTTTTCTTTT
TATGCAATTT ATCTCGGAGT TCAAGTTCTT GCCCATACAC AGGAATTTAG TCCTAGCAGC
AAAATAATTT CTTTACTTTT GGTAATTAGC TTAAGCTCTT TTCTTTTCTT AAATCTTCAT
CAAAAAGAAT TTTTAAATCA AACAAATATT ATTTTAACTA TTCTCTTTTT ATTATGTAGT
TTGTTAATTC TTTTATTTTT CAACTATAAA TGGATTCCGG TAATCTTCTT TGGCATTGTT
GGTCTTGAAG TAAGTATCAA TTTGATAGCT AGTCTTGATA ATATTTCTTA TCAAAAAAAC
TTTGACTATA CTAATTTCAC TAAAAACATC TCTGAAAGTA CGGCATATTT ACATAAATAT
GACTCTGGCT TATATCGAAC AGAAAAGACT TTTACACGTT CAGATGACGA TCCTTTAAGC
AATGACTATT ATGGCATTAG TAATTTCAAC TCTATTTCTG ACCGTTCAAC TATTAATTTA
ATTGACTATT TAGGTCTTGA AAACAATGAC AACTCTTTTA CTAATAATTT TGCTACTCCC
TTATCTGATA GTATTTTAGG CATTAAATAT AATATCGTTC CGATCAAGAA TCGAAGAAAA
CTCCCCGCAG AACAACAAAT AGTTTTTACT AGTGCGTTTT ATCGACCTGA TTTGATTAGG
AATAAAGTTG TCAAAAGTTT TAAACAGGTA CAAATTAGGA AAAATTCTTC AGCTTTACCA
CTTATTTTTA TCTCCCCATC ACATAAAAAA ATAAACTTTT ATACCAGCAT GCCATCTGCT
AATCAAAATA CTCTTTTTAA TAGCATTGTT GGTAAAAAAA TTAATCTTTT TAATAGCTTA
TATTTAACCA ATCCTAATAA GATAGAAAAT ATTAAATCCA CTAAAAACGT TAATGAATAT
CAAAAAATTA ACAAAAGCAG AATTGCAACA CTTTCTTTTA AAATATCTTC TTTTCAAAAG
GGACCTTATT ATTTAGAACT CCCTTCAAAT CTAGATGCAG AATCTGTTTC TATTACTGTT
AATGGTCATC ATCTTAATAA TCAAGATTTG GGAATTTCAA ACAAATTATT AAATATTGGT
TATTACTCAC CAAATACTCC AATTAAAGTC ACTTTCAAGT TAAATAATGA AAAAACTAAT
TTGAGCGGAA TTCGAGTACT ACAATTTAGA GAGCATGAAT TTAACCAAAT TATTCGTCAA
TTCAACGAAA AACAGCCTAT AACTCAACAA ACTAGTCCTA TTTCTTTAAA GCTTAATTAC
ACTGCTAGAA GAGATAAAAT TCTTAATTCT ACTATTCCTT ATTCAAAAAA CTGGCTAATT
TTAGATAACG GCAAACTTCT TAAAACGGAA AAATTTGCTC ATACTTTTTT GAGTGCCAGA
CTAAGCAAAG GAAAACATCA TTTAACTTTG ATTTATATTC CCTTTGCCTT CCTAATTGGA
CTTATAATTT CAATCGTTTC ACTTATAATT ATATTTATTC TCAAGCCAAA AAAGACTTAA
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| Protein sequence | MFITKIKIHF KNKYLYWLSF LLPACIFASY FIYRNHEILT VDLGQQYIDF LAFYKNNLFS
NPLNFIFTFS SGLGNSFIGT WAYYLTSPFN FLLLIFPKSQ LPEAILLIIS LKIGSIGLSG
FYYFQKFFNG DNKIFALAAS LAFSLSGFVV SYNLNLMWLD SLILLPLLLD AIDKLEDKRR
HYFYLTMITF LLWLTNFYTG FMVLFFGLLY FINTLLNSSF SKKQIILQYV TKSFFGTSLA
ALILLPSFFE ILNGKIHSDT TLSMGFQFPP YQTFYKLTIG AFNFTEMEKG LPNIFLTSIF
TLLCILYFIN QHFSIKEKLL SALLLTFLFF SFSFNPLILL WHLGQYPVWY PARFSFIFSF
YAIYLGVQVL AHTQEFSPSS KIISLLLVIS LSSFLFLNLH QKEFLNQTNI ILTILFLLCS
LLILLFFNYK WIPVIFFGIV GLEVSINLIA SLDNISYQKN FDYTNFTKNI SESTAYLHKY
DSGLYRTEKT FTRSDDDPLS NDYYGISNFN SISDRSTINL IDYLGLENND NSFTNNFATP
LSDSILGIKY NIVPIKNRRK LPAEQQIVFT SAFYRPDLIR NKVVKSFKQV QIRKNSSALP
LIFISPSHKK INFYTSMPSA NQNTLFNSIV GKKINLFNSL YLTNPNKIEN IKSTKNVNEY
QKINKSRIAT LSFKISSFQK GPYYLELPSN LDAESVSITV NGHHLNNQDL GISNKLLNIG
YYSPNTPIKV TFKLNNEKTN LSGIRVLQFR EHEFNQIIRQ FNEKQPITQQ TSPISLKLNY
TARRDKILNS TIPYSKNWLI LDNGKLLKTE KFAHTFLSAR LSKGKHHLTL IYIPFAFLIG
LIISIVSLII IFILKPKKT
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