| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1378 |
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| Symbol | |
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| ID | 4439394 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | - |
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| Start bp | 1374421 |
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| End bp | 1375590 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 639673211 |
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| Product | major facilitator superfamily permease |
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| Protein accession | YP_815178 |
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| Protein GI | 116630006 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.000192638 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.00000000000893216 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGGAAAAGA AGCAATCGAT TTATACTAAA GACGTTATTT TAGTTATGGC AGCGTCTTTC
TTTTTTATGT TTTCAGTAAT GTTTGTAACG CCGCTAATTA ATGGCTATGC AATCAGTTTA
GGTGCCAGTG CAGTATTTGC TGGCATTATA ACCGGAATTA TGAGTGTAGT GTCAATGTTT
TTACGTCCAG TAGCTGGTAA CTTAACTGAT CGCTTTTCAA AGTATAGCTT ATCGTTTATT
GGCGGAGTAT TAATTTTGAT TGGGGTTGCA GGTTATTGCT TCTCACCTTC AGGTAATTGG
TTGCTAATTT TTAGATTAAT TAACGGTACT GGCTTTGTTT TAGCAACTGT TTGTATGACA
ACTTGGCTAG CATTTCTAGT TCCGCGTAGT CATGTTGGGG AAGCAATGGG CTTTTATGGT
TTGATGAATG CTTTAGCGAT GGCTCTTGCG CCTGCTTTAG CGATTAATCT ATATAAAGTT
ATTGGTTATA AGTCTGCCCT TTGGCTTGCT GTAGTTGCTG CAATCTTAAT GATTATTTCT
ATCCAATTTG TTGGAAACCA TGCTAAGCCT AAGGTTAATA GTAGTAAGAA AAGAAAAATT
AAGATTATTC AAAAAGATGC TATTCCTATT GCTTTGTTAA CTACTTTCTT TGCAATTCCA
TATTTTATTA CTCAAGCTGA TATTGTCGTT TATGTTGAAA GACAACATTT TTCAATTGCG
GTAGGTTATT TTTTTGTTAT TTATGCAATT GCTTTACTCT TGATTAGAAT TGGTTTGAAA
AAATATTTCG ATTTAATTCG CTTTGGATTT TGGTTTTGGC TAAGCCTAAT AGCAATGATT
TTATTTTTAA TTATTGCTAG TTTTATGGTT AATAACTGGT TAATGGGCTT AGCTGCTATC
ATGCTTTCAA TTGGTTATGG AGTTATTTAT TCGGTTAATC AATCAACGGC TTTGATGTTA
GCCCCAATTG AAGAACAAGG CTTAGCTAGT TCGACATTTT ATCTTGGACT TGATATTGGA
ATGGCAACTG GTCCAATGAT CGGAGGCGTG ACCGCTCAAA ATTTAGCTCC AGATTACTTT
TATCCTGTCT TATTAGTGAT TGTGCCAATA ATTTTAATTA TTTATTTTGT CTATCGTAAG
AAATTGAATA GTGCCCTGAG CCGTCGTTAG
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| Protein sequence | MEKKQSIYTK DVILVMAASF FFMFSVMFVT PLINGYAISL GASAVFAGII TGIMSVVSMF
LRPVAGNLTD RFSKYSLSFI GGVLILIGVA GYCFSPSGNW LLIFRLINGT GFVLATVCMT
TWLAFLVPRS HVGEAMGFYG LMNALAMALA PALAINLYKV IGYKSALWLA VVAAILMIIS
IQFVGNHAKP KVNSSKKRKI KIIQKDAIPI ALLTTFFAIP YFITQADIVV YVERQHFSIA
VGYFFVIYAI ALLLIRIGLK KYFDLIRFGF WFWLSLIAMI LFLIIASFMV NNWLMGLAAI
MLSIGYGVIY SVNQSTALML APIEEQGLAS STFYLGLDIG MATGPMIGGV TAQNLAPDYF
YPVLLVIVPI ILIIYFVYRK KLNSALSRR
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