| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1366 |
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| Symbol | |
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| ID | 4439417 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | - |
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| Start bp | 1363384 |
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| End bp | 1364250 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 639673199 |
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| Product | hemolysin-like protein |
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| Protein accession | YP_815166 |
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| Protein GI | 116629994 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1253] Hemolysins and related proteins containing CBS domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00000187888 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.0000000807238 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTAGTG ATCCCGGTGC GGGTGATATA TTTAGCAAAT TAAGAGCTAA ATTTCGCGGC
GATGAAGATA TTGATGGCCA ACGTAAGCTA AATAAAATTT TAAATAAATT ACATGAGCAA
AAAGAGATTA GTGATCGTGA GTTTTCAATG ATGGAGGGTA TTCTTGAGTT TGAAGAAAAA
ATGGCTCGAG AAGTAATGGT TCCTAGAACA GATGCCTTTA TGGTCGATAT CAATGATAAT
TTTCAAGAAA ACTTAGATCA AATCTTGAAA GAACCTTATT CAAGAGTACC TGTCTATGAT
GGTGATAAGG ATAAGATTGT TGGTGTTATT CATATTAGGA CGGTTTTACG GAAAGCCCAT
AAGATTGGCT TTGATAAGTT AGATTACGAT CAGGTAATGT TTAAGCCTTT ATTTGCACCT
GAAACAATTG AATTAGGTGA ATTATTAGTT GAAATGCAGC AAACTCAAAG ACAGCTTGCA
ATTTTAACTG ATGAATATGG TGGTGTTGTA GGACTGACAA CAATTGAAGA TTTAATTGAA
GAGATTGTTG GCGACATTGA TGATGAGGTT GATAAGGCTG AGGTCCTATT TTCAAAAATT
GGGCCAAGAG AATATGTAAT TTATGGGAAG ATGCCTTTAG CTGATTTTAA TGAAGAATTT
GGAACTGATT TAGCAATGGA AGATGTGGAT ACGGTTGCTG GTTACGTAAT CACTAAATTA
GGAATGATTC CGGCTAAAGG AGAAAAACTA AGCGTCAAAC TTGATAATGG AATGATTTTA
ACGACTAGAC GAATGAAGGG GTCGCGTTTA TTAACGCTGT TACTTACAAT TCCAGAAAAA
CAAGAAAAGG AAGAAGCTAA AGATTAA
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| Protein sequence | MSSDPGAGDI FSKLRAKFRG DEDIDGQRKL NKILNKLHEQ KEISDREFSM MEGILEFEEK
MAREVMVPRT DAFMVDINDN FQENLDQILK EPYSRVPVYD GDKDKIVGVI HIRTVLRKAH
KIGFDKLDYD QVMFKPLFAP ETIELGELLV EMQQTQRQLA ILTDEYGGVV GLTTIEDLIE
EIVGDIDDEV DKAEVLFSKI GPREYVIYGK MPLADFNEEF GTDLAMEDVD TVAGYVITKL
GMIPAKGEKL SVKLDNGMIL TTRRMKGSRL LTLLLTIPEK QEKEEAKD
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