| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1334 |
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| Symbol | |
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| ID | 4439455 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | - |
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| Start bp | 1330100 |
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| End bp | 1331377 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 639673167 |
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| Product | superfamily II DNA/RNA helicase |
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| Protein accession | YP_815134 |
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| Protein GI | 116629962 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4098] Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000000453066 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 149 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATATTGA TGACCAAATT AAAAGGACGC CAGTGGATAT CTGATCAGAA TAACCATAAC
ATAAACGGCG AAACGACAAA AGTTCCTGCA ATGATAAATG GAATTTGTCA GCGGTGTAAT
ACCAAAGCAG TATCAAAATT ACCAGATGGG CGACGATATT GCCGAGAGTG TATTGGACTA
GGGAGAATAA CAGAAGGGGA TGAACTAGAG CGAAATGTTG AGAATGGTAA TTATCCTAAA
ATACTTACGC CATTAAGCTG GAGGGAAACA TTAACTGAAC AGCAAGAATT GATCTCCAGG
GAATTAGTAA ATTCTTTTAA AGAAAGGCGT AATCATTTAA TTCACGCAGT AACTGGGGCT
GGTAAGACTG AAATGTTATT TAAGGTAGTA GAAGAAGCTT TAAAAGGTGG TTTCCGAATA
GCGATCGCTA CACCAAGAAT TGACGTAGTT GACGAATTGT TTCCACGTTT TCAAGCAGCT
TTTGAAAACG TGAAAATTGG CAAATATCAT GGACGTGAAC ATCACGAAGT GAGGGATGAG
CAATTCGTGA TTTGTACAAC ACACCAACTT TTAAAGTTTT ATCAAGCTTT TGACTTAATT
GTAATTGATG AGGTAGATTC TTTTCCCTTT TATGAAAATA AGATGTTGCA TTTTGCGGCA
GAAAACGCAG TAAAGAAAGT GGGTTGCACT TTTTTTCTAA CAGCAACGCC GGATTCCAAG
TTATTAAGAC AAGCGAAGAA TAAAACAATA AATTATTCTT TGCTTAAAAG GCGGTTTCAT
CAAGGATTGT TGCCAGTACC TAAAGAAAAA TATTTTTTTA AGTCTTATAT TTCAAATAAG
GGAAAAGTTC ACCCGACTTT GATTAAGCAA ATTAAGAAAA TCCTTGATAT GAAAAAGCCA
CTTTTAATAT TTGTCCCACG AATTAAAGAA TTGTCAACTT ACGAAAAGTA TTTAAGCTCA
ATTTTTAAAA CAAGTAAAAT TGTTAGTGTA TATGCCGGCG ATAAGGATCG ACAAGCAAAA
GTTGCTAGTT TTCGCAGGCG AGAAACAGAT ATTTTGTTGA CAACAACGAT TTTAGAACGA
GGAGTAACTT TTAAGCATGT TCAAGTAATC GTAATTGCTG CTGATGATCC AATTTATAAT
ACGCCGAGCT TAGTTCAGAT TGCAGGAAGA GTGGGGAGAA GTGCTGATGA TCGAGATGGA
TTAGTCTTAT TTTGTTATCA CAAATATACT AAAAGTATCC AAGAAGCGAT GAAACAGATT
AGGATGATGA ATAGATGA
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| Protein sequence | MILMTKLKGR QWISDQNNHN INGETTKVPA MINGICQRCN TKAVSKLPDG RRYCRECIGL
GRITEGDELE RNVENGNYPK ILTPLSWRET LTEQQELISR ELVNSFKERR NHLIHAVTGA
GKTEMLFKVV EEALKGGFRI AIATPRIDVV DELFPRFQAA FENVKIGKYH GREHHEVRDE
QFVICTTHQL LKFYQAFDLI VIDEVDSFPF YENKMLHFAA ENAVKKVGCT FFLTATPDSK
LLRQAKNKTI NYSLLKRRFH QGLLPVPKEK YFFKSYISNK GKVHPTLIKQ IKKILDMKKP
LLIFVPRIKE LSTYEKYLSS IFKTSKIVSV YAGDKDRQAK VASFRRRETD ILLTTTILER
GVTFKHVQVI VIAADDPIYN TPSLVQIAGR VGRSADDRDG LVLFCYHKYT KSIQEAMKQI
RMMNR
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