Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_1294 |
Symbol | |
ID | 4439483 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | + |
Start bp | 1287383 |
End bp | 1287916 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 639673127 |
Product | DNA polymerase III, epsilon subunit related 3'-5' exonuclease |
Protein accession | YP_815095 |
Protein GI | 116629923 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 120 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 90 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACTTTA CTGCAATGGA TTTTGAAACG GCAAACAGTC ATCCTGAAAG TGCATGTTCT CTTGCCTTAG TTATGGTTAG AAACAATGAA ATTGTCGACC GTTTTTATAC AGTTATTAAT CCGCAAATGC CTTTTGATGG TCGAAATATC AGAATTCATG GTATTACTGC CGAAGACGTT AAAAATGCAC CAACAATGGC TGAGGTTTGG CCTAAAATTA AAAAATTATA TCAGCCGGGA ATGTTAGTAG CCGCTCATAA TGCACGTTTT GACTGCCGAG TGATGGAAAA GTCACTTGCT CGCTATAATA TTCCAGCCCC TCACTACTTT GCAATTGATA CTTTAGCAAC TAGCAAAGCA TTTGAACCCA ATCTTCCTAA TCACAAATTA GACACAGTTT CGGAAGCTTT AGATATCAAC TTATGGCATC ACCATAACGC TTTAAGTGAC AGTGAAGCTT GCGCAGGAAT TTTAATTGAA GAAAATAAAC GTGTTGGGGA TGATCCAATC AAAAAAATGG TTAAGCAAAT TTAA
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Protein sequence | MNFTAMDFET ANSHPESACS LALVMVRNNE IVDRFYTVIN PQMPFDGRNI RIHGITAEDV KNAPTMAEVW PKIKKLYQPG MLVAAHNARF DCRVMEKSLA RYNIPAPHYF AIDTLATSKA FEPNLPNHKL DTVSEALDIN LWHHHNALSD SEACAGILIE ENKRVGDDPI KKMVKQI
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