| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1274 |
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| Symbol | |
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| ID | 4439498 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | - |
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| Start bp | 1268998 |
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| End bp | 1270017 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 639673107 |
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| Product | Type II secretory pathway/competence component |
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| Protein accession | YP_815075 |
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| Protein GI | 116629903 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 70 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAAGAGG AAAGATTAGT GAAGATACGA AGCATCTTTA TGAAGAAGGA TAAGCTAAAT
AGCGCTGCTC AATTAATTTT TATTGATTAT TTAAGACAAG CACTGATTAA CGGTTATTCG
CTTAATGCTA GTTTAAAATT GCTGCCTAAA ATATGGAGTG GTGATTCTAA TCAATTAGTT
TATATAAGTA AACAGGTTGA AGAAGGTAGG CAACTTGGGG ATGTATTGCA TGAAGTAGGA
TTTTCTAGTA CTTTAGCTGC ACAAATAAAT ATGGCAATTA TTGATGGCAA TTTATTGTCT
TGTTTGGACC AATTAAGTAA ACTTATTCGC TTGAAAAATA AGCAGTTAAA GAAGCTGCGA
GGAGAATTAG CTTATCCAGC ACTTTTAATT GGAATGATGG TTACGCTATT AATTTGTATG
CAAACTTTTT TAAAGACAGA AATGTCAGAT AATGACTGGA CGAGTAATGT AATGCTGGGT
GGACTTGTGA TGTTAGTTAT TATAGGTGCA TTTTTTATTA GTAAGGTAAT CAGGCTACTT
AATAGGCAAG ATTATTATGC ACTGAAGAAA TTAACTAGGA TACCTGTAAT TGGACCAACA
TTAAATTTAT ATGTTCACTA TCTTATCGTG TCTGACTTAG CTGTTTTATT AATCAACGGC
TTTTCATTAC AAAAAATTTG CCAACTTACT GATCAGCAAC CAAAGAACTC ATTACAGCAA
GTCTTAGGAA CAAAAGTGAA GAATCAGTTA GAAAAAGGAA CTGAGATTAA AACAATTATT
GAGAATGAAG CCTTTATTTC TAATAACTTA GTTATGCTTT TAGAAACCGG AACAACAAGA
GAGCAAATTG GGAAAAGAGC GCTATTACTT AGCAAGACAC TTTTTTATGA ACTAAATCTC
AAATTAAATG GTTTAATCGT TAATTTGCAG CCACTATGCT TTATTTTTAT TGGAATTTGT
ATTCTGGGGA TGTATTTGAA AATTTTAATG CCAATGTATC ATTTAATGGA AACAATGTAG
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| Protein sequence | MKEERLVKIR SIFMKKDKLN SAAQLIFIDY LRQALINGYS LNASLKLLPK IWSGDSNQLV
YISKQVEEGR QLGDVLHEVG FSSTLAAQIN MAIIDGNLLS CLDQLSKLIR LKNKQLKKLR
GELAYPALLI GMMVTLLICM QTFLKTEMSD NDWTSNVMLG GLVMLVIIGA FFISKVIRLL
NRQDYYALKK LTRIPVIGPT LNLYVHYLIV SDLAVLLING FSLQKICQLT DQQPKNSLQQ
VLGTKVKNQL EKGTEIKTII ENEAFISNNL VMLLETGTTR EQIGKRALLL SKTLFYELNL
KLNGLIVNLQ PLCFIFIGIC ILGMYLKILM PMYHLMETM
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