| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1226 |
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| Symbol | rpsD |
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| ID | 4439549 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | + |
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| Start bp | 1229968 |
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| End bp | 1230642 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 639673063 |
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| Product | 30S ribosomal protein S4 |
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| Protein accession | YP_815033 |
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| Protein GI | 116629861 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0522] Ribosomal protein S4 and related proteins |
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| TIGRFAM ID | [TIGR01017] ribosomal protein S4, bacterial/organelle type |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 91 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTGAACT TATTTCTCAT ATTTTACTCC AAAAAATTAT TATTTTTTAT GGAGGATTTT
TTTATGTCAA GATATACTGG TCCAAGTTGG AAACGTTCAA GACGCTTAGG TATCTCACTT
TCAGGTACTG GTAAGGAAAT TAGCCGTCGT AACTACGCAC CTGGTGATCA TGGTCCTAAC
AACCGTGCTA AGGTTTCTGA ATATGGTCAA CAATTAAAGG AAAAGCAAAA GTTACGTTGG
ATGTTTGGTT TAAATGAACG TCAATTCCAA AACTTATTCA TCCGTGCTGG CAAGATTCGT
GAAGGTAAGC ACGGTGTTAA CTTTATGGCT TTACTTGAAA GACGTTTAGA CAACATCGTT
TACCGTTTAG GTTTAGCTTC AACTAGAGAA CAAGCTAGAC AACTTGTTAA CCACGGTCAC
ATCTTAGTAG ATGGCAAGCG TGTTGACATT CCTTCATACG AAGTTAAAGT TGGTCAAGAA
ATCAGCTTAA GAGATAAGTC AAAGAACTTG CAACAAGTTA AGGACGCTTT AGATGCAGTT
GTATCACGTC CACCATTTGT TTCATTTGAC GACAGCAAGA TGACTGGTAC TTTAGTTCGT
CTTCCAGAAC GTGACGAAAT GGAACCAGAA GTTGATGAAG CTCTTATCGT TGAATGGTAC
AACAAGAAGC TTTAA
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| Protein sequence | MLNLFLIFYS KKLLFFMEDF FMSRYTGPSW KRSRRLGISL SGTGKEISRR NYAPGDHGPN
NRAKVSEYGQ QLKEKQKLRW MFGLNERQFQ NLFIRAGKIR EGKHGVNFMA LLERRLDNIV
YRLGLASTRE QARQLVNHGH ILVDGKRVDI PSYEVKVGQE ISLRDKSKNL QQVKDALDAV
VSRPPFVSFD DSKMTGTLVR LPERDEMEPE VDEALIVEWY NKKL
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