Gene LGAS_1216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_1216 
Symbol 
ID4439574 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp1215323 
End bp1215943 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content34% 
IMG OID639673053 
ProductDNA repair protein 
Protein accessionYP_815023 
Protein GI116629851 
COG category[L] Replication, recombination and repair 
COG ID[COG2003] DNA repair proteins 
TIGRFAM ID[TIGR00608] DNA repair protein radc 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones104 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATATTTA TGAAAAAAGA AGAACTATTG CAAACTGATG TTGATCTAGT AAAAAAGTTG 
GCTAGATCTT TGAAAGAAAA AGATATTATT ACTTTTGATA GTTTATTTAA AAAGCTAGAA
GAAGTAGGGA TAAATAGCTT TAAGGAATTG TGGCAGTATG CGGCTAGTCC AAAATGCGAA
GATGAAATAG CAGTTGTACT GCAGCTCATG TTAGAGCGCG TAAAGGGCGT TAATAATAAA
GAAATTGAGA GCCTCTACTC TAGTTCGCAG GTAGGATGTT ATATAGCTGA CAAGTTATGT
GGCCGTCCGC AAGAAGAATT ATATGGAATT TATCTTGATT CAAAGAATAA AATTATTGCT
GAAAAGTTAA TTTTTCAAGG AACAGTAAAT AGGGCAGTTG CTCATCCACG AGATATTTTT
CGCTGGGCAG TAATTTATAA CAGTACGGCC TTTTTTGTGG CTCATAATCA TCCAAGTGGG
GATGAACAAC CATCTCAGCA TGATTTACGA TTTACTAAGA AATTAGTAGA AGCAAGTAAA
TGTATGGGAA TTGATTTTCT AGATCATTTT ATTGTGACTG ATAATACTTA TTTAAGCTTT
CGAGAGATGG AACTTCTTTA A
 
Protein sequence
MIFMKKEELL QTDVDLVKKL ARSLKEKDII TFDSLFKKLE EVGINSFKEL WQYAASPKCE 
DEIAVVLQLM LERVKGVNNK EIESLYSSSQ VGCYIADKLC GRPQEELYGI YLDSKNKIIA
EKLIFQGTVN RAVAHPRDIF RWAVIYNSTA FFVAHNHPSG DEQPSQHDLR FTKKLVEASK
CMGIDFLDHF IVTDNTYLSF REMELL