| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1141 |
|---|
| Symbol | |
|---|
| ID | 4439639 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus gasseri ATCC 33323 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008530 |
|---|
| Strand | - |
|---|
| Start bp | 1143611 |
|---|
| End bp | 1144633 |
|---|
| Gene Length | 1023 bp |
|---|
| Protein Length | 340 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 23% |
|---|
| IMG OID | 639672979 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_814949 |
|---|
| Protein GI | 116629777 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3274] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00000475631 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 0.0000472475 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGTTGTGA GTAAAAGAAA AAGTAGAAAT TTTGGATTAG ACTTAGTTAA AGTTTTAGCT
TGTATTTTAG TAATATGTTT ACATTCATTA ACTCCTACAA GTTTAGTTGT AAAAAATAAT
ATTTTTAATT CAAGTGTTTA TTATTCGGGA ACTATAGCTA TCCCTATTTT TTTTATGGCA
AGTAGTTATT TTGTTTTAAA TAAAAAAGAT ATTTCGTTTT ATTATGTTTT AAGAAGAGTA
GTAGACATCT TCTTTATAAT AGTTGGTTGG GTATTAGTTT ATAGTATTTG TCAGTTAATT
GTAAAACATC GTTTTATCTT TTTAGAAGAG TTAAAAGGGA CAGCTTTTGT AACGACTTCA
AGCAATCATT TTTATCATTT TTGGTTTTTT TGGGCATTAA TTTTTATGCT TATAATTTCA
CCTTTATTAT GGTATATATT ACATAATAAT TTTAAAAGAT ACCTATTTTT AACTTTTATA
TTAACTTTAA TCTGTGTTGG AGTTGATATA TCTCTTCATT TGGATAACTC AATAAATATT
CAGAATATAC CGCAAGTTTT TAGAATATAT TTATATATTG AATATTATCT TTTAGGAGGA
TTGATCGGTA ATCTACGATT TATAAAAATA AAGGAATATG TAAAAAAACA TATAATGATA
ATTAGTTTTA GTGCTATATT TTTATATTTT ATAGTAATTA TATATTCAAT ATGGAATAGA
AATGTAATTC ATTGGGATTA TGCTGAAGCT AATTATGGAA ATATTTTAGT TATTTTTACT
TCAGTTTTGA TATTAATTAT TTTTTCTGTA TTAAATCCTA AAAATAAAAA GTTAATTGAG
TTTATTATAC CTGCAACAAT GGGAATATAT ATGATACATC CGTTTTTCAT TAATAAGTTA
ATGAAAATTC ATTTCTTTTA TGAATATCCC GTTTTTATGG TACCGATCTT ATTTGTTCTT
TGTTTAATAA TTGTAGAAAT CGCATTACGT ATTCCTGTTA TTAAGCGTTT TTTTAAACTT
TAA
|
|---|
| Protein sequence | MVVSKRKSRN FGLDLVKVLA CILVICLHSL TPTSLVVKNN IFNSSVYYSG TIAIPIFFMA
SSYFVLNKKD ISFYYVLRRV VDIFFIIVGW VLVYSICQLI VKHRFIFLEE LKGTAFVTTS
SNHFYHFWFF WALIFMLIIS PLLWYILHNN FKRYLFLTFI LTLICVGVDI SLHLDNSINI
QNIPQVFRIY LYIEYYLLGG LIGNLRFIKI KEYVKKHIMI ISFSAIFLYF IVIIYSIWNR
NVIHWDYAEA NYGNILVIFT SVLILIIFSV LNPKNKKLIE FIIPATMGIY MIHPFFINKL
MKIHFFYEYP VFMVPILFVL CLIIVEIALR IPVIKRFFKL
|
|---|
| |