| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1027 |
|---|
| Symbol | |
|---|
| ID | 4439772 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus gasseri ATCC 33323 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008530 |
|---|
| Strand | - |
|---|
| Start bp | 1029307 |
|---|
| End bp | 1029951 |
|---|
| Gene Length | 645 bp |
|---|
| Protein Length | 214 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 639672870 |
|---|
| Product | putative primosome component related protein |
|---|
| Protein accession | YP_814840 |
|---|
| Protein GI | 116629668 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3935] Putative primosome component and related proteins |
|---|
| TIGRFAM ID | [TIGR01446] DnaD and phage-associated domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.0152207 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 84 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGTCTT TTGCGGCTAT CCAAAATGAA GGCTTTACAG TCATTTCTAA TAGTCTCTTA
CGTTACTATC CCTCTTTAAA AATATCTGAA ATTGAAGCAA TGCTTTTATT GCAATTAGAA
TCATTCAAAC AAGCAAATAA TTTTTTCCCA AGTGATAATG ATTTATCAGG AAGAATGAAT
TTGTCGCCAG TCGAAGTTTC GCAGCTAATT CAGGATTTAA TTGATAAAAA ACTGCTTGAA
TTAGGGCAAA AGAGAGATAG TGAAGGTCGA ATTACAAATT TTTATGATCT CAAGCCTTTA
TATCAAAAAT TAGACACAAT TATTGATGAA AGAGATACGA ATGCTTACGA TGAAGTTTAC
TCAGGAGAAG GAACAAAAAA AAGAGAATCA GTAAATCCAC TGCAAGAATT AGTAAGACAA
TTCGAGATTG AATTTGGACG CCTTTTAAGT CCAATTGAAA AGCAAGAAAT TGCTGCTTGG
CTTAATATAG ATCATTACAA TCCAGAAATA GTTAAATTGG CTCTGCGTGA AGCAATTTTA
GCGCAGGTAT ATAATTTTAA GTATGTTGAT CGAATTTTAC TAAATTGGCA ACGACACGGT
CTTACAACTA CAGACCAAAT TAAAAACTTC CTTCAACGAA ATTAG
|
|---|
| Protein sequence | MASFAAIQNE GFTVISNSLL RYYPSLKISE IEAMLLLQLE SFKQANNFFP SDNDLSGRMN
LSPVEVSQLI QDLIDKKLLE LGQKRDSEGR ITNFYDLKPL YQKLDTIIDE RDTNAYDEVY
SGEGTKKRES VNPLQELVRQ FEIEFGRLLS PIEKQEIAAW LNIDHYNPEI VKLALREAIL
AQVYNFKYVD RILLNWQRHG LTTTDQIKNF LQRN
|
|---|
| |