Gene LGAS_0938 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_0938 
Symbol 
ID4439857 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand- 
Start bp930629 
End bp931312 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content31% 
IMG OID639672793 
Productintegral membrane protein 
Protein accessionYP_814764 
Protein GI116629592 
COG category[S] Function unknown 
COG ID[COG3548] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.000000154072 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value0.402272 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAAGAA ATAAACACCA ACACAATTTT AACGATTTTT CAGATCAAGA AAAAGAAAAG 
TTAAAAACAG TTCGACAAGA ATTAACACAG GCACAAAAGA AAGAACCCGA AAGACTCTGG 
GAACATTTAC AAGCCTTTAA TGATGGTGTA ATGGCGATTA TTATCACAAT TATTGTTTTA 
GAAATTCAGC CAGCAATTCA CGAAGTTCAT TATGAACAAT TTATTGCTAA TATTATCGTC 
TTTTTGATTA CTTTCTTTGT AGTCGCTGAC TTTTGGTATG ATCTTCACTT GGCTTTTTCT 
TACTATATTT TTAAACCAAC AAAAACGATT GCGATACTAG ATTTCTTTTT CCTAGCTGAC 
CTTTCTCTTC TACCTGTGAT GACTAAGTGG ATCATGGCTG AAAGCTCAAC CTTTGCAGTT 
GCCAACTTCG GGATTGTTTT TTTAATTGCC AAAATTTTGG AATATTTAAT TCAATACTTT 
GGTGCGAAAA AGACAGCAAA ATATTCACAA ATTATGAATA TTATTATCAG TAGATCATTT 
ATTAGAAAGG TTGCTGTTAC TCTATTTTTA AATGTAATCT TGATTGTTCT GTCATTATTT 
ATTCCGAGAA TAGCTATGAT TCTGTACTTA GTTATTCCGG TTACTTCATT TCTATTTCCT 
GTTAAACGTA ATAAAATAGT CTGA
 
Protein sequence
MRRNKHQHNF NDFSDQEKEK LKTVRQELTQ AQKKEPERLW EHLQAFNDGV MAIIITIIVL 
EIQPAIHEVH YEQFIANIIV FLITFFVVAD FWYDLHLAFS YYIFKPTKTI AILDFFFLAD 
LSLLPVMTKW IMAESSTFAV ANFGIVFLIA KILEYLIQYF GAKKTAKYSQ IMNIIISRSF 
IRKVAVTLFL NVILIVLSLF IPRIAMILYL VIPVTSFLFP VKRNKIV