| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0918 |
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| Symbol | |
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| ID | 4439942 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | + |
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| Start bp | 917178 |
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| End bp | 918101 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 639672774 |
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| Product | integrase |
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| Protein accession | YP_814745 |
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| Protein GI | 116629573 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02224] tyrosine recombinase XerC |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 0.0200604 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTAAAG AAAATGATAA GTTAATCAAA CAATTTCAAG ATTACTTGAA CTATGAACGT
AATTATAGTA AAAATACTGT AAGCTCTTAC TTAAATGATC TAGATGAAGC AAAACAATTT
TTTAAAGAAA ATGGTGGCTT TGGCGGCTGG GATAAAGTTA AAAGTCGCGA TGTCGAGATT
TTCTTACAAA GTTTAGCTGC ACAGAATAGG TCTAGAACAA CCCAGGCACG TAAGATGTCG
AGCTTGAGAT CTTTTTATCG CTTTCTTGTT AAGCGAGAAG TGTTAGAAAA TGATCCCATG
CAGACAATTA GCTTAAGATT AGGAGAGAAG AAGCTACCAC AGTTCTTCTA TGAAAAAGAG
ATGCGACAAG TCTTTGATAG TCTTGCTGGT CATGATAAGT TGGTAGTGAG AAATCGCGCC
ATGTTTGAGC TTTTTTATGC GACAGGGATG CGGTTAAGTG AGATGGCATC TTTGAAGCTA
GATCAGATTG ATTTTGATTT AAAGATTATC TTAGTTCATG GGAAGGGTAA TAAAGATCGC
TATGTTCCTT TTGGAAAAGA TGCACTTGAT GCTTTAAGAG AATATCGTGA TGATGTTCGG
CTAGCTCTAC TTGGTCAGAA TGAAGATTTG GGCTATGTAT TTTTGAATAA TCGCGGTCAA
AAATTAACTG GTCGCGGGAT TGAATATATT ATGCAACAAG TTTTCATTAA GGCTGGAGTT
GGAGGAAAGG TTCATCCCCA TATGCTTAGA CACTCTTTTG CAACTGAAAT GCTCAATAAT
GGGGCAGACC TGAGAAGTGT TCAGGAATTA TTAGGGCATG AATCTTTATC TACGACGCAG
ATTTATACGC ACGTTACGAT GAAGCATTTA CAAGCAGATT ATCAAAAATT TTTCCCAAGA
AAAGATAAGA AAGACGAGGC ATAA
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| Protein sequence | MSKENDKLIK QFQDYLNYER NYSKNTVSSY LNDLDEAKQF FKENGGFGGW DKVKSRDVEI
FLQSLAAQNR SRTTQARKMS SLRSFYRFLV KREVLENDPM QTISLRLGEK KLPQFFYEKE
MRQVFDSLAG HDKLVVRNRA MFELFYATGM RLSEMASLKL DQIDFDLKII LVHGKGNKDR
YVPFGKDALD ALREYRDDVR LALLGQNEDL GYVFLNNRGQ KLTGRGIEYI MQQVFIKAGV
GGKVHPHMLR HSFATEMLNN GADLRSVQEL LGHESLSTTQ IYTHVTMKHL QADYQKFFPR
KDKKDEA
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