| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0895 |
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| Symbol | |
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| ID | 4439867 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | + |
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| Start bp | 886175 |
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| End bp | 887476 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 639672751 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_814722 |
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| Protein GI | 116629550 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000000900502 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.000000000000951989 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGTACAATT ATTGTGTTAG CACAAACGAA AAGAGTGAAA AAATGACTTA TTCTGAACAA
CTATTAGATG CAATTCAAAA TCATGATTTT TCTGATAATC ATATTCTTCT TAAAAAAGCA
CTAGAAAATG ATGATCCAGA AGTTTTAGCT TCTTTAGCAG AAAATTTGAC TGACCTTGGT
TTTACTGATC TTTCTAAGGA AGTTTACCGC TATTTGATTG CTCAATTTCC AAGAGAAGAC
TTGTTTAAGG TATACTTAGC TGAGATTTTA TTAAATGATG GCGATGAAGA TGATGGCTTG
CAGCTTTTAT ATGATGTAAA GCCAGAAAGT GATGCTTATA TTGAAAGCTT GCTTGATTTA
GCTGATTATT ATCAAAGTAA TGGTCTAATT GAAACAGCTC GTCAAAAGCT CTTAGAAGCT
CATAAATTAG CTCCTGAAGA AGATGCAATC AACTTCGGCT TAGCAGAACT TGATTACTTA
AGTGGCGATT ATGGTGAAGC ATTAGGACTA TACCGCGAAC TTGCAAAAGA AAATAAAACC
TTTGGTGAAG TAGTCTTAAG TCAAAGAATT GCTGCTTGCC TCGCAAAATT AGGTGAGTAC
GAAGAAGCTG CCAACGAAAT TAAGAGTCAT GAAAATGATA TCTTGAGTAT TGATGCATTG
TATGAAGCCG GCTTAATTAT GTTATCTGCT GGCGATAATA AGGCCGCAAT TAAATACTTA
GATCAAGTGA TTGAAACTCA ACCAGATTAT GTAAATGCCT ATCCTTTGCT TGCTCAAGCT
TATGCAGCAG AAGATAACAA TGAAGAAGTA TTGAGAACCG CCCAGACAGG ACTTTCTTAT
AATGAACTAG ATGAGGTCTT GTATAGCTTG GGTGCAAAAG CAGCTGCTAA CTTAAACCAA
TTGGATGAAG CAGAGCGCCT ACTCAAGAAG GGGCTAGAAA TCGCTCCCGA CAATAGTGAC
TTGCGCTTGC AGTTATCTAA CTTGTATCTT CACCAGCACC AAGATGAGGC AAATATTGCC
TTATTTAAGG ATCTTGATGA TGAGGAACTT GAACCACAAG CTCACTGGAA TATGGCTATC
TCATATCAAA GACTTGAAGA CTATGATAAG GCGAAGAGCG AATTCTTGCT TGCTTATCCT
GCCTTTCAAA AGAATGCAAG CTTCTTGAGA CAGATGATTA GCTTGTTCTA TGAATTGCGA
GAGATTCCGA CGACCAAGGA ATTGATTAAG AAGTATCTGC AAGTTCAACC TGACGATATT
GATATGCAAG ATATGTTAGA TGGATTGAAT AGTGAAGAGT AG
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| Protein sequence | MYNYCVSTNE KSEKMTYSEQ LLDAIQNHDF SDNHILLKKA LENDDPEVLA SLAENLTDLG
FTDLSKEVYR YLIAQFPRED LFKVYLAEIL LNDGDEDDGL QLLYDVKPES DAYIESLLDL
ADYYQSNGLI ETARQKLLEA HKLAPEEDAI NFGLAELDYL SGDYGEALGL YRELAKENKT
FGEVVLSQRI AACLAKLGEY EEAANEIKSH ENDILSIDAL YEAGLIMLSA GDNKAAIKYL
DQVIETQPDY VNAYPLLAQA YAAEDNNEEV LRTAQTGLSY NELDEVLYSL GAKAAANLNQ
LDEAERLLKK GLEIAPDNSD LRLQLSNLYL HQHQDEANIA LFKDLDDEEL EPQAHWNMAI
SYQRLEDYDK AKSEFLLAYP AFQKNASFLR QMISLFYELR EIPTTKELIK KYLQVQPDDI
DMQDMLDGLN SEE
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