Gene LGAS_0862 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_0862 
Symbol 
ID4439904 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp853435 
End bp853878 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content33% 
IMG OID639672718 
ProductNUDIX family hydrolase 
Protein accessionYP_814689 
Protein GI116629517 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.000267263 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones80 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAAAC GTTCTGAGCC CGTAACTTTA ACTAACATGT GTATGATTAA GAAAAAAGAT 
AAAATTTTAG TTCTTGATCG AAATGATCCT GTTTGGCCTG GTTTAACTTT TCCTGGTGGT
CACGTTGAAC CGCATGAGTC TTTTCATGAT TCCGTAGTTA GAGAAATCAA AGAAGAAACA
GGTCTCTTTA TTAAAGATCC GCATTTAGTT GGAGTAAAAC AATTCTTTGA TAAAAATGAT
GAACGATATT TAGTCTTCTT TTATATAGCT ACTGACTTTA CTGGAACAGT AAAGGCTTCT
GATGAGGGAA AATTGACCTG GATGACGAAG GAAGAATTGA TAAGTAAAAA ATTAGCCTAT
AATTTTGATC ATGATCTCCC AGTTTTCTTT GATAAAAATT TAAGTGAACA TCTATTAGAC
GGAAAAATAG ATCAAACCTA CTAA
 
Protein sequence
MMKRSEPVTL TNMCMIKKKD KILVLDRNDP VWPGLTFPGG HVEPHESFHD SVVREIKEET 
GLFIKDPHLV GVKQFFDKND ERYLVFFYIA TDFTGTVKAS DEGKLTWMTK EELISKKLAY
NFDHDLPVFF DKNLSEHLLD GKIDQTY