| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0830 |
|---|
| Symbol | thyA |
|---|
| ID | 4439975 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus gasseri ATCC 33323 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008530 |
|---|
| Strand | + |
|---|
| Start bp | 817077 |
|---|
| End bp | 818033 |
|---|
| Gene Length | 957 bp |
|---|
| Protein Length | 318 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 639672687 |
|---|
| Product | thymidylate synthase |
|---|
| Protein accession | YP_814659 |
|---|
| Protein GI | 116629487 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0207] Thymidylate synthase |
|---|
| TIGRFAM ID | [TIGR03284] thymidylate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.0147447 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 82 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAACTT TAGAGCAACC ATACTTGGAT TTACTAAATA AAATTATGAT TGAAGGTCAT
GATAAGGAAG ATAGAACTGG CACGGGGACA AGAAGTATAT TTGGAGCTCA AATGCGGTTT
AATCTGAGTG AGGGTTTTCC TATTTTAACT ACTAAACGAG TTCCTTTTGG TCTTATTAAA
AGTGAATTGT TGTGGTTTTT AAGAGGAGAT ACTAATATTC GGTTTCTATT AGAACACAAT
AATCATATTT GGGATGAATG GGCGTTCAAA AACTGGGTTG AAAGTGATGA ATATCATGGC
CCTGATATGA CTAATTTTGG ACTCAGAAGT CAAGAAGACG CCAAATTTAA GCAAGTCTAT
CAAGAAGAGA TGAAGAAATT TGATGAGCGA ATCTTAGCTG ACCGGGATTT CGCAGTCAAA
TTTGGTAATC TTGGAGATGT TTATGGCGCT CAATGGCGTC ACTGGCAAAA GCGAGAGGGT
GGTTTTATTG ATCAAATTCA AAATGTGATT GATCAAATTA AAAAGACGCC ATATTCAAGA
AGATTGATTG TTAGTGCCTG GAATCCAGAA GATGTACCAA ATTCAGCACT CCCACCTTGT
CATGTTTTAT TTCAATTTTA TGTTAATGAT GGTCGTTTAA GCGTTCAGCT TTATCAGCGA
TCAGGAGATA TGTTTTTAGG AGTTCCCTTT AATATTGCGA GCTATTCTTT ACTAGTTAAT
TTAATTGCTC AAGAAACTGG TCTTAAACCA GGTGAATTTA TTCATACTTT AGGGGATGCG
CATATTTATC GAAACCATTT TGATCAAGTA AAAGAATTAT TGACTAGAAA ACCATATGAC
TCGCCAAAGC TTTGGCTAAA TCCTGATAAG AAAAAGATTG AAGACTTTGA AATGTCAGAT
ATTAAACTCG TTGACTATAA GCATCATGGT ACTATTAAAG CTCCCGTAGC TGTTTAG
|
|---|
| Protein sequence | MATLEQPYLD LLNKIMIEGH DKEDRTGTGT RSIFGAQMRF NLSEGFPILT TKRVPFGLIK
SELLWFLRGD TNIRFLLEHN NHIWDEWAFK NWVESDEYHG PDMTNFGLRS QEDAKFKQVY
QEEMKKFDER ILADRDFAVK FGNLGDVYGA QWRHWQKREG GFIDQIQNVI DQIKKTPYSR
RLIVSAWNPE DVPNSALPPC HVLFQFYVND GRLSVQLYQR SGDMFLGVPF NIASYSLLVN
LIAQETGLKP GEFIHTLGDA HIYRNHFDQV KELLTRKPYD SPKLWLNPDK KKIEDFEMSD
IKLVDYKHHG TIKAPVAV
|
|---|
| |