Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_0575 |
Symbol | |
ID | 4440216 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | - |
Start bp | 603240 |
End bp | 603587 |
Gene Length | 348 bp |
Protein Length | 115 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 639672432 |
Product | XRE family transcriptional regulator |
Protein accession | YP_814409 |
Protein GI | 116629237 |
COG category | [K] Transcription |
COG ID | [COG1396] Predicted transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00000000000142648 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 62 |
Fosmid unclonability p-value | 0.969931 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGAAGAGCA TGATTGGCGA TAGAATACGT GAGTTGAGGA CATCTCATAG ACTCTCACAA ACAGAACTAA GCAAATTATT ACATGTATCT CAACAAACTA TTACTAAATG GGAAAATGGG AAAGCTGAGC CTTCAAGCGG TGCTTTAGCT AAACTAGCTG AATACTTTGA TGTGTCAGCT GATTATTTAT TAGGTTCAGA TAAAACTAGT GAGCCTAAAT CCGTTGACCT AGAAAAAGAT CCTGTCGTTC TTAGTTACGG TGGACGCCCT GTTTCAGAAG AAGATATGGA CGTTATCAAA GCAATTCTTG AAAGACATAA GAATGATGGA GACGTTCACT ACGAGTAA
|
Protein sequence | MKSMIGDRIR ELRTSHRLSQ TELSKLLHVS QQTITKWENG KAEPSSGALA KLAEYFDVSA DYLLGSDKTS EPKSVDLEKD PVVLSYGGRP VSEEDMDVIK AILERHKNDG DVHYE
|
| |