Gene LGAS_0575 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_0575 
Symbol 
ID4440216 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp603240 
End bp603587 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content38% 
IMG OID639672432 
ProductXRE family transcriptional regulator 
Protein accessionYP_814409 
Protein GI116629237 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000000142648 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value0.969931 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAGAGCA TGATTGGCGA TAGAATACGT GAGTTGAGGA CATCTCATAG ACTCTCACAA 
ACAGAACTAA GCAAATTATT ACATGTATCT CAACAAACTA TTACTAAATG GGAAAATGGG
AAAGCTGAGC CTTCAAGCGG TGCTTTAGCT AAACTAGCTG AATACTTTGA TGTGTCAGCT
GATTATTTAT TAGGTTCAGA TAAAACTAGT GAGCCTAAAT CCGTTGACCT AGAAAAAGAT
CCTGTCGTTC TTAGTTACGG TGGACGCCCT GTTTCAGAAG AAGATATGGA CGTTATCAAA
GCAATTCTTG AAAGACATAA GAATGATGGA GACGTTCACT ACGAGTAA
 
Protein sequence
MKSMIGDRIR ELRTSHRLSQ TELSKLLHVS QQTITKWENG KAEPSSGALA KLAEYFDVSA 
DYLLGSDKTS EPKSVDLEKD PVVLSYGGRP VSEEDMDVIK AILERHKNDG DVHYE