| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0554 |
|---|
| Symbol | |
|---|
| ID | 4440229 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus gasseri ATCC 33323 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008530 |
|---|
| Strand | + |
|---|
| Start bp | 583689 |
|---|
| End bp | 584156 |
|---|
| Gene Length | 468 bp |
|---|
| Protein Length | 155 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 639672411 |
|---|
| Product | DNA-binding ferritin-like protein (oxidative damage protectant) |
|---|
| Protein accession | YP_814389 |
|---|
| Protein GI | 116629217 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0783] DNA-binding ferritin-like protein (oxidative damage protectant) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 3.38419e-16 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTATC CAAAAACTAA AAAAATTATG AATGAAATCG TTGCCGATTT AACTCAAACA
CATATGGTTG TGCATCAACA TCATTGGTAT ATGCTCGGAA GAGGATTTTT GAAATTACAT
CCATATTTAG ATGATGTAAT GGATGAATTA GCTGAGCAAC AAGATGGAGT TGCTGAAAGA
TTAATTGAGA TTAACGGTAG TCCAATTTCA ACTTATGAAG AAGTGTTAGA AGAAACTAAC
GTTCCAGATC AAGTTGGCAG TTGGGATTTA TCCATGGAAG AAAGATTCCA ATTAATTGTC
AATGCATATA AGCAATTACG AGATGATTAT GAACGTGGTA TTAAGATTAG TGAAGATGAA
GGAGATAATT CCACTAATGA CTTGTTAATT GCTTATCATA CCGCCGTTGA AAAGAGAATC
TGGATGATGT CAGCTGAACT TGGCAAGAGA CCTGGCGAAG GTGAATAG
|
|---|
| Protein sequence | MAYPKTKKIM NEIVADLTQT HMVVHQHHWY MLGRGFLKLH PYLDDVMDEL AEQQDGVAER
LIEINGSPIS TYEEVLEETN VPDQVGSWDL SMEERFQLIV NAYKQLRDDY ERGIKISEDE
GDNSTNDLLI AYHTAVEKRI WMMSAELGKR PGEGE
|
|---|
| |