| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0552 |
|---|
| Symbol | |
|---|
| ID | 4440227 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus gasseri ATCC 33323 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008530 |
|---|
| Strand | + |
|---|
| Start bp | 581254 |
|---|
| End bp | 581937 |
|---|
| Gene Length | 684 bp |
|---|
| Protein Length | 227 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 639672409 |
|---|
| Product | phosphate uptake regulator |
|---|
| Protein accession | YP_814387 |
|---|
| Protein GI | 116629215 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0704] Phosphate uptake regulator |
|---|
| TIGRFAM ID | [TIGR02135] phosphate transport system regulatory protein PhoU |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 1.5092700000000001e-19 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCATGAAG TTTTTTTAGA TGAATTACGT AAGTTAAATA CCCGTTTTAT GGGGATGGGG
ATTGATGTTA GCGAGTCAAT TGAGGAAGCT ACCCAAGCCT TTGTTGATCA TGATAAAAAA
TTAGCTCAAA GCCTGGTAAA AGATGATCAA AAAGTTTCTC GGGCTGCTAC TAAAGTTGAG
AAGAGAACCT TGAAGTTAAT GGCTCTGCAG CAGCCGGTTG CTAGTGATTT TAGAAATGTA
ATTAGTATCT TAAAGGCAAC GGGAGATTTA GAACGAATTG GTGAAAATGC ACTTTCAATT
GCTTGGGAGA CAATAAGAGT AAAGGGTAAT CCACGTATTC CAGAAGTTGA AGCAATCATT
AAGTCAATGT CTAAGAAAGT TAACTTCATG CTTGATCAAG TTTTAAAAGC TTATGTTCAA
GGTGATGAAA AATTAGCTCG GGAAGTTGCT AAAAAAGATG ACGAAGTAGA TGAAGATTAT
GTAAAGGCGC GTAAGTTGAT TATTGCTGGA ATTAAACAAG ATCCAGAAGC CGCTGTTGCT
TCTTCAAGTT ACTTTATGGT AATTCGTTTA CTGGAACGGA TTGGAGACCA CGTAGTTAAC
TTGGCGCAGT GGGTTGTTTA TAAGATGTCA GGCGAATTAG TTGACTTAAA TACTAAAGAT
ACTGATGAAA TGACTGAACT ATAA
|
|---|
| Protein sequence | MHEVFLDELR KLNTRFMGMG IDVSESIEEA TQAFVDHDKK LAQSLVKDDQ KVSRAATKVE
KRTLKLMALQ QPVASDFRNV ISILKATGDL ERIGENALSI AWETIRVKGN PRIPEVEAII
KSMSKKVNFM LDQVLKAYVQ GDEKLAREVA KKDDEVDEDY VKARKLIIAG IKQDPEAAVA
SSSYFMVIRL LERIGDHVVN LAQWVVYKMS GELVDLNTKD TDEMTEL
|
|---|
| |