| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0533 |
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| Symbol | |
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| ID | 4440243 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | - |
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| Start bp | 561634 |
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| End bp | 563292 |
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| Gene Length | 1659 bp |
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| Protein Length | 552 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 639672390 |
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| Product | alpha, alpha-phosphotrehalase |
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| Protein accession | YP_814368 |
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| Protein GI | 116629196 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | [TIGR02403] alpha,alpha-phosphotrehalase |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.000000000584391 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATAATT TAGGCAATAA AGTAATTTAT CAAATTTACC CAAAATCTTT TTATGACTCA
AATAATGATG GTATTGGCGA CTTACGTGGC ATCATTGAAA AAATTGACTA TATTAAGAAG
CTAAATGTAG ATTTCATTTG GTTTAACCCA TTTTTTGTTT CTCCACAAAA TGACAACGGC
TATGACATTG CTGATTATAA AAAAATTGAT CCTCGTTTTG GAACAATGGA TGATTTCGAA
GAATTGGTAA CTAAATTAAA AAGTATTAAC GTTAATGTGA TGCTCGACAT GGTTTTAAAT
CACTGCTCAA CAGAACATGA ATGGTTTAAA AAAGCTCTAG CCGGAGATAA GAAGTATCAA
AAATTCTTTT ATCTTAGAAA AGGTAAGGAC GGACAACTAC CTAATAACTG GCAATCAAAA
TTTGGTGGTC CAGCTTGGTC AAAATTTGGC GACACTGATT ACTACTATCT CCACCTCTAC
GACCCAACTC AAGCAGATCT TGACTGGCAC AATCCTGAAG TTCGCGCTGC CTTAATAGAT
GTTGTAAACT TTTGGCGTAA TAAAGGAGTT CACGGCTTCC GCTTTGACGT AATCAACGTT
ACAGGGAAAG ATACTACCTT AGTTAACTCA ACAGATCCGG TGCAAGAAAA ATCCCTTTAT
ACTGATACAC CAGTGGTGCA GCAATATCTA AAAGAATTAA ATGCAAAATC CTTCGGTCAA
GACCCGGAAT CAGTTACTGT TGGAGAAATG TCATCAACTA CGATTGAAAA TTCAATTGCT
TATACCCGTC CAGAAGATCA TGAGCTTTCA ATGGTCTTTA CCTTTCATCA CCTCAAAGTT
GACTATAAAA ACGGTGAAAA ATGGTCTAAG ATGCCTTTTG ACTTTAAGAA ATTAAAAGAT
ATTATGCTTA CCTGGAATAG TAAGATTGAT CAAGGTGGCG GCTGGCAAGC TCTATTCTGG
AATAATCACG ACCAGCCTTG GGCATTAAAT CGATTCGGTG ATACTGGAAA ATATCACAAT
AAATCTGCTG AGATGTTAGC TCTTGCTCTT CATCTACTAC GCGGAACGCC TTACATTTAT
ATGGGCGAAG AAATTGGTAT GATGGATCCT CACTATACTT CCATGAAGGA TTATGTTGAT
ATCGAAGCTT TGAATGCCTA TGACGCATTA ATCAAAAAAG GTATTGATGA AAAAGAAGCT
TTTGAAATTG TTCAGTCTAA AGCTCGCGAT AATTCAAGGG TTCCAATGCA CTGGGATAAT
TCTCAATATG CTGGTTTTAG TGACCACAAA CCTTGGCTTA TGCCAACAGA CCAAGATAGA
ATTAACGTTG AAAAAGAACT ACTGGATGGT GAAATTTTTA ATTTCTATCA AAAATTAATT
AAACTCAGAA AATCAGAAAA ATTGATCTCT GAAGGTCACA TCAAACCATT TTTAATGGAA
CACCCACAAG TTATGGCCTA TGAACGTTAT TTAGATGACT CTAATGAAAA ACTTTTAGTA
TTTGCAAACT TCTATGGCAA AGAAACTGAA GTTAAAATAC CTGCTGAATA TTTAAATAAG
GCGGGGCATA TTTTAATTCA AAATTACGAT AAAAATCTTG CTTCTCTTCC TTTAGCCTTG
CAATTAAAGC CTTATGAAGC TTTAGCAATC AAACTTTAA
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| Protein sequence | MNNLGNKVIY QIYPKSFYDS NNDGIGDLRG IIEKIDYIKK LNVDFIWFNP FFVSPQNDNG
YDIADYKKID PRFGTMDDFE ELVTKLKSIN VNVMLDMVLN HCSTEHEWFK KALAGDKKYQ
KFFYLRKGKD GQLPNNWQSK FGGPAWSKFG DTDYYYLHLY DPTQADLDWH NPEVRAALID
VVNFWRNKGV HGFRFDVINV TGKDTTLVNS TDPVQEKSLY TDTPVVQQYL KELNAKSFGQ
DPESVTVGEM SSTTIENSIA YTRPEDHELS MVFTFHHLKV DYKNGEKWSK MPFDFKKLKD
IMLTWNSKID QGGGWQALFW NNHDQPWALN RFGDTGKYHN KSAEMLALAL HLLRGTPYIY
MGEEIGMMDP HYTSMKDYVD IEALNAYDAL IKKGIDEKEA FEIVQSKARD NSRVPMHWDN
SQYAGFSDHK PWLMPTDQDR INVEKELLDG EIFNFYQKLI KLRKSEKLIS EGHIKPFLME
HPQVMAYERY LDDSNEKLLV FANFYGKETE VKIPAEYLNK AGHILIQNYD KNLASLPLAL
QLKPYEALAI KL
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