Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_0334 |
Symbol | |
ID | 4440587 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | - |
Start bp | 358001 |
End bp | 359350 |
Gene Length | 1350 bp |
Protein Length | 449 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 639672193 |
Product | aminopeptidase C |
Protein accession | YP_814178 |
Protein GI | 116629006 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3579] Aminopeptidase C |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.152514 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.0000000000259652 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCAAAG AAATTACAAA TGATCTTATC AATGATTTTG AAAATGACTT TAACTCAAGT AAAGCAAACA AAATTGCTGC AAGAGCTGCT CAAGAAAACG GCATTTTCAA AGCTAGTCAA AATTTACAAA CTAAAATTAA CTTAGACCCA ACTTTTTCAA TTGAAATCGA CACTGGTAAA GTTGCTAACC AAAAACAATC TGGTCGTTGC TGGATGTTTA GTGCTTTAAA TACTATGCGT CATTCGATTC AAAAGAATTT CAAAATTAAG GATTTTGAAT TATCTCAAAA CTACACTAAC TTCTGGGATA AATTTGAAAA ATCAAACTGG TTCTTTGAAA ATGTTATCGC TACTGCTGAC AAAGACTTAG GCGATCGTAA AGTTAGTTTC TTATTCACTA CTCCACAACA AGATGGTGGT CAATGGGACA TGCTTTGCGG AATTATTGAA AAATACGGCA TTGCTCCAAA GAAAGTTTAT CCAGAAACTG CCAATGCAAC AAATTCTAGT GCTTTAAACG ATACTTTAAA TACTTTGCTT AGAAAAGATG GTCTTGAATT ACGTAAGATG GTTCAAGATG GGAAGAGCGA AGATGAAGTT CAAGCACGTA AGAATGAAAT GCTTCGTGAA GTTTACCGTA TTTTAGCCAT TTCTCTTGGT GTTCCACCTA AGAAATTTGA TTTTGAATAC AAAGACGACG ATGGCAACTA TCACAGAGAT GCTGACTTGA GCCCACAAGA CTTCTTTAAG AAATATGTTA ACTGGGATTT GAGTCAATAT ATTTCCACAA TTAATGCCCC AACTAAGGAT AAGCCTTTCC ACAAGGTATT TTCTGTTGAA TACTTAGGAA ACGTTGAAGG CGGTCGTCAA GTTCGTCACT TGAATTTACC AGTTGATGAA ATGAAAGACT TAATTATCAA GCAACTTAAA AATGGTGAAG TTGTTTGGTT TGGTTCAAAT GTTGTTAAAG ACTCTGAACG TCAAGCTGGT TTACTAGACA CCGAATTGTA CAAGCGCGAT GATCTGTTTG ATGTTGACTT TAATATGTCA AAAGCTGATA TGCTTGATTC AGGCGAAAGT ATGATGGATC ACGCCATGGT TATAACTGGT GTTGATTTAG TAGATGGCAA ACCAACTAAG TGGAAGATTG AAAACTCATG GGGCGAAAAA CCAGGATTTA AAGGTTACTT TGTCATGAGT GATAAGTGGT TTGATAAATT TGTTTACCAA GCAGTTATCA ACAAGAAATA CCTTAGCGAC GACTTGAAGA AAGCATTTGA AGAAGGAAGC AAAGATCCAA TTCAATTACT TCCTTGGGAT CCAATGGGTG CTTTAGCTAA GAATTATTAG
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Protein sequence | MSKEITNDLI NDFENDFNSS KANKIAARAA QENGIFKASQ NLQTKINLDP TFSIEIDTGK VANQKQSGRC WMFSALNTMR HSIQKNFKIK DFELSQNYTN FWDKFEKSNW FFENVIATAD KDLGDRKVSF LFTTPQQDGG QWDMLCGIIE KYGIAPKKVY PETANATNSS ALNDTLNTLL RKDGLELRKM VQDGKSEDEV QARKNEMLRE VYRILAISLG VPPKKFDFEY KDDDGNYHRD ADLSPQDFFK KYVNWDLSQY ISTINAPTKD KPFHKVFSVE YLGNVEGGRQ VRHLNLPVDE MKDLIIKQLK NGEVVWFGSN VVKDSERQAG LLDTELYKRD DLFDVDFNMS KADMLDSGES MMDHAMVITG VDLVDGKPTK WKIENSWGEK PGFKGYFVMS DKWFDKFVYQ AVINKKYLSD DLKKAFEEGS KDPIQLLPWD PMGALAKNY
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