| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0325 |
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| Symbol | |
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| ID | 4440578 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | + |
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| Start bp | 351689 |
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| End bp | 352555 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 639672184 |
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| Product | nucleoside-diphosphate-sugar epimerase |
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| Protein accession | YP_814169 |
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| Protein GI | 116628997 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.00224359 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 9.32819e-17 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAATATT TAATTACTGG AGCAACAGGT AACTTAGGTG AAAAGGTTAC TCGTTGGCTT
AGAACTATGA CTTCTGAAAA TAATATTCGG GTTGGAATTC ATAATTTAAA AAAAGCGAAT
AAGTTTGATG ATCTAGCTGT TGAAAAGGTT AAGCTAGATT ACTTTGATTT AGATACTCTT
CAAAAAGCAG TTTCTGGCGT TGACTTGGTT GTTTATATTC CTAGTCTTAC TTATGATTTG
CAAAAAAGGA TTACAGAATT TGAAAATGTG TTGCAAGTAG TAAAAAATGC AAAAGCAAAA
TTAATTTTTG TTAGCTTTTT TGCGGACCAA GAAAATAATC CTTTTGTGAT GTCGCCATTT
TATGCTTATG TACCAAGGCG ATTAGCTAGC TCAAATGTTG AGTATAGTAT TGTGAAAAAT
AGTCTTTATG CTGATCCCTT AGTTCCATAT CTTGAAGAAT TAATTAAGCG TAAGAACATA
ATTTATCCTG TTGGTACCCA GCCACTTTCT TTTATTACTC GAAATGATAG TGCTCATGCG
ATTGCTTGCT TAGCTATGCA ACCTGTGATG CGTGATCAAG GTCAGACTTA TTTACTAAGT
ATGGATAAAA ATTATAATAT GGTTGAATTG TCCTATATTA TGTCACGAAT TACTGATCAT
AAAATTGGTT ATGCACCGGT CACAACTACT GAATTTGCTA AAATTTATGC CCAAGAAGGC
GATGGAAAAG AATTAGCATC AATGTATGCT GGTGGTGCAA AAGGATTATT AAGCGCAACA
TCAGACGATT TTCATCGCTT AACTGGACGT GAGCCGGAAG AGGTGGAACA TTTTTTGCGA
AATGGTTATC AAATAGCTCG TTTGTAA
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| Protein sequence | MKYLITGATG NLGEKVTRWL RTMTSENNIR VGIHNLKKAN KFDDLAVEKV KLDYFDLDTL
QKAVSGVDLV VYIPSLTYDL QKRITEFENV LQVVKNAKAK LIFVSFFADQ ENNPFVMSPF
YAYVPRRLAS SNVEYSIVKN SLYADPLVPY LEELIKRKNI IYPVGTQPLS FITRNDSAHA
IACLAMQPVM RDQGQTYLLS MDKNYNMVEL SYIMSRITDH KIGYAPVTTT EFAKIYAQEG
DGKELASMYA GGAKGLLSAT SDDFHRLTGR EPEEVEHFLR NGYQIARL
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