| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0310 |
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| Symbol | secY |
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| ID | 4438820 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | + |
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| Start bp | 342058 |
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| End bp | 343353 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 639672169 |
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| Product | preprotein translocase subunit SecY |
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| Protein accession | YP_814154 |
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| Protein GI | 116628982 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0201] Preprotein translocase subunit SecY |
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| TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 8.823840000000001e-28 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGTTCTCGA CCTTGAAGAA CGCCTTTAAG GATAAAGATA TTAGATCTAA GATCTTTTTT
ACACTCTTTA TCCTGTTGCT TTATCGTATC GGAGCTAATA TAACAGTTCC GGGAGTTAAT
GCAAAAGCTA TTACACGGGT TGCACAGACT GGTTTAGTCC CAATGTTGGA TACAGTCAGT
GGTGGTGGAT TAGATACATA TTCAATCTTT TCTTTAGGGG TTTCACCTTA TATCACTGCT
CAAATTGTTA TTCAATTACT CCAAATGGAT ATTGTTCCTA AGTTAGTTGA GTGGGGAAAA
CAGGGAGAAG TCGGAAGACG AAAAACAAAT CAAGTAACGC GCTATCTTAC TTTAGTGGTT
GCCTTTGTTC AAAGTCTCGG AATTACTCTT GGTTTTAACG TTTTAACCGA AATGGGTTTG
GTTAAAACGC AAACTCCTCA AACCTATATT GAGATTGCCA TTATTATGAC AGCCGGGACA
ATGCTTTTGA CCTGGCTAGG TGATGAAATC ACTGATAAAG GTCTGGGAAA TGGTGTATCT
GTAATTATTT TTGCAGGTAT TATTGCCCGT CTTCCTAATG GAATTTATCA GCTATTTAAA
GATTTCATTA TTAATAATAG TGCTAGCGAT CGTTGGCAAG GGATTTTGTT CTTCATCGCG
ATCATTATTG CCATTTTACT AGTAACTCAA TTTGTTACAT GGTTTCAACA GGCTGATTTG
CGAGTACCTA TCCAATATAC TCGTAGAGCA GCAACAAGTG GCTCCGAAAG TTTCCTACCT
TTAAAGGTTA ACGTTTCTGG AGTTATTCCA GTTATTTTTG CCAGTTCCTT TATTATTACA
CCAGCTACAA TTTTGATGGC TTTTCAAAGA TCTCATGGAA ATGAACAATG GTTTAAGATT
TGTAATCAAA TATTTAGTTT ACAAACCACA CCTGGTGCAT TAATTTATAC ATTGTTAATC
ATTTTGTTCA CTTTCTTCTA CGCCTTTGTT CAAGTAAATC CAGAAAAGTT GGCTGAGAAC
TTGCAAAAGC AAGGAGCCTA CATTCCTAGC GTTTGGCCAG GAAAAGATAC ACAAAAGTAT
GTATCTAAAA TTTTGATTAG ATTATCAACA GTAGGTGCAG TATTTTTAGG CCTTGTTGCC
TTATTACCGC AACTTGCTAC AAATATTTTT GGTTTACCAA GTTCAATTGG ACTTGGCGGA
ACAAGTCTTT TAATCGTTAT TGGTGTGGTT TTAGAATTAG CCCGTCAAGT TGATGGACTA
CTAATGAAGC GCGAATACGT TGGATTTATT AGATAG
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| Protein sequence | MFSTLKNAFK DKDIRSKIFF TLFILLLYRI GANITVPGVN AKAITRVAQT GLVPMLDTVS
GGGLDTYSIF SLGVSPYITA QIVIQLLQMD IVPKLVEWGK QGEVGRRKTN QVTRYLTLVV
AFVQSLGITL GFNVLTEMGL VKTQTPQTYI EIAIIMTAGT MLLTWLGDEI TDKGLGNGVS
VIIFAGIIAR LPNGIYQLFK DFIINNSASD RWQGILFFIA IIIAILLVTQ FVTWFQQADL
RVPIQYTRRA ATSGSESFLP LKVNVSGVIP VIFASSFIIT PATILMAFQR SHGNEQWFKI
CNQIFSLQTT PGALIYTLLI ILFTFFYAFV QVNPEKLAEN LQKQGAYIPS VWPGKDTQKY
VSKILIRLST VGAVFLGLVA LLPQLATNIF GLPSSIGLGG TSLLIVIGVV LELARQVDGL
LMKREYVGFI R
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